RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 C7orf31Q8N865 590 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 RGS22Q8NE09 1264 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 TTC14Q96N46 770 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 SAMD11Q96NU1 681 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 UIMC1Q96RL1 719 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 PHOX2BQ99453 314 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 UBE2ZQ9H832 354 aaPredicted RBP10.38□□□□□ -0.75
XRN1-208ENST00000470537 SUGCTQ9HAC7 445 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 TTC41PQ6P2S7 1318 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 EMSYQ7Z589 1322 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 M0R2C6 588 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 NFIBO00712 420 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 GH1P01241 217 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 KCNA5P22460 613 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 EDNRBP24530 442 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 SNAP25P60880 206 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 RPS6P62753 249 aaKnown RBP10.37□□□□□ -0.75
XRN1-208ENST00000470537 RBL2Q08999 1139 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 TMEM63BQ5T3F8 832 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 ALYREFQ86V81 257 aaKnown RBP10.37□□□□□ -0.75
XRN1-208ENST00000470537 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 IWS1Q96ST2 819 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 FSD1Q9BTV5 496 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 IL17RBQ9NRM6 502 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 GMPR2Q9P2T1 348 aaKnown RBP10.37□□□□□ -0.75
XRN1-208ENST00000470537 ANAPC4Q9UJX5 808 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 MTMR7Q9Y216 660 aa10.37□□□□□ -0.75
XRN1-208ENST00000470537 WDR19Q8NEZ3 1342 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 MUC6Q6W4X9 2439 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 LRRC37A2A6NM11 1700 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 SCN10AQ9Y5Y9 1956 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 ORC4O43929 436 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
XRN1-208ENST00000470537 CXCL10P02778 98 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 AMHP03971 560 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 PCP11498 1178 aaKnown RBP10.36□□□□□ -0.75
XRN1-208ENST00000470537 CKBP12277 381 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 PTGS1P23219 599 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 SLC16A2P36021 539 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 NOVP48745 357 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 NT5C2P49902 561 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 PTK7Q13308 1070 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 STXBP2Q15833 593 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
XRN1-208ENST00000470537 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
XRN1-208ENST00000470537 PTCRAQ6ISU1 281 aaPredicted RBP10.36□□□□□ -0.75
XRN1-208ENST00000470537 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 NSUN6Q8TEA1 469 aaKnown RBP10.36□□□□□ -0.75
XRN1-208ENST00000470537 PURBQ96QR8 312 aaKnown RBP10.36□□□□□ -0.75
XRN1-208ENST00000470537 C11orf16Q9NQ32 467 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 TCP11L1Q9NUJ3 509 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 PRKAG3Q9UGI9 489 aa10.36□□□□□ -0.75
XRN1-208ENST00000470537 SCN5AQ14524 2016 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 LINC01553A4QN01 128 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 FAM86C2PA6NEL3 165 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 DCXO43602 365 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 LAMC2Q13753 1193 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 TIGD5Q53EQ6 642 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 ZMYM1Q5SVZ6 1142 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 KCNV1Q6PIU1 500 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 TICAM2Q86XR7 235 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 GDPD5Q8WTR4 605 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 AFG1LQ8WV93 481 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 CLEC4DQ8WXI8 215 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 MRPL38Q96DV4 380 aaKnown RBP10.35□□□□□ -0.75
XRN1-208ENST00000470537 MFSD14AQ96MC6 490 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 DCTPP1Q9H773 170 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 GTF2IRD1Q9UHL9 959 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 MTUS1Q9ULD2 1270 aa10.35□□□□□ -0.75
XRN1-208ENST00000470537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
XRN1-208ENST00000470537 DDX49Q9Y6V7 483 aaKnown RBP10.35□□□□□ -0.75
XRN1-208ENST00000470537 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
XRN1-208ENST00000470537 LCHNA4D1U4 455 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 NMT2O60551 498 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 PPFIA4O75335 1185 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 LGR5O75473 907 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 EIF3JO75822 258 aaKnown RBP10.34□□□□□ -0.75
XRN1-208ENST00000470537 MMP3P08254 477 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 FGRP09769 529 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
XRN1-208ENST00000470537 CTDSPL2Q05D32 466 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 ALX1Q15699 326 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 PKN1Q16512 942 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 CCDC178Q5BJE1 867 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 TTBK2Q6IQ55 1244 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 GDF6Q6KF10 455 aaPredicted RBP10.34□□□□□ -0.75
XRN1-208ENST00000470537 CCDC62Q6P9F0 684 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 SLC30A10Q6XR72 485 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 SEPT14Q6ZU15 432 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 DHX37Q8IY37 1157 aaKnown RBP10.34□□□□□ -0.75
XRN1-208ENST00000470537 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.34□□□□□ -0.75
XRN1-208ENST00000470537 POP1Q99575 1024 aaKnown RBP10.34□□□□□ -0.75
XRN1-208ENST00000470537 TMEM47Q9BQJ4 181 aa10.34□□□□□ -0.75
XRN1-208ENST00000470537 NBNO60934 754 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 ARHGEF15O94989 841 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 PDHBP11177 359 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 MRE11P49959 708 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms