RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KDM4AO75164 1064 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 PPFIA4O75335 1185 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 CSPG5O95196 566 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 HOXC8P31273 242 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 ATP6V0A1Q93050 837 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 IWS1Q96ST2 819 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 OSBPL7Q9BZF2 842 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 ECHDC1Q9NTX5 307 aa14.1□□□□□ -0.15
LSM2-209ENST00000470083 C17orf102A2RUQ5 167 aa14.09□□□□□ -0.15
LSM2-209ENST00000470083 CTSHP09668 335 aa14.09□□□□□ -0.15
LSM2-209ENST00000470083 PTPN21Q16825 1174 aa14.09□□□□□ -0.15
LSM2-209ENST00000470083 SYTL5Q8TDW5 730 aaPredicted RBP14.09□□□□□ -0.15
LSM2-209ENST00000470083 RPGRIP1Q96KN7 1286 aa14.09□□□□□ -0.15
LSM2-209ENST00000470083 PLAGL2Q9UPG8 496 aa14.09□□□□□ -0.15
LSM2-209ENST00000470083 MRVI1Q9Y6F6 885 aa14.09□□□□□ -0.15
LSM2-209ENST00000470083 PLXNA3P51805 1871 aa14.09□□□□□ -0.15
LSM2-209ENST00000470083 RALGAPA2Q2PPJ7 1873 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 WDR87Q6ZQQ6 2873 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 RANBP6O60518 1105 aaKnown RBP14.08□□□□□ -0.16
LSM2-209ENST00000470083 EIF3JO75822 258 aaKnown RBP14.08□□□□□ -0.16
LSM2-209ENST00000470083 PDGFBP01127 241 aaPredicted RBP14.08□□□□□ -0.16
LSM2-209ENST00000470083 PDHBP11177 359 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.16
LSM2-209ENST00000470083 ATF7P17544 494 aaPredicted RBP14.08□□□□□ -0.16
LSM2-209ENST00000470083 USH1GQ495M9 461 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 ADGRD2Q7Z7M1 963 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 P2RX5Q93086 422 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 RIPOR3Q96MK2 946 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 TAAR1Q96RJ0 339 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 RMDN3Q96TC7 470 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 TMEM47Q9BQJ4 181 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 COL20A1Q9P218 1284 aa14.08□□□□□ -0.16
LSM2-209ENST00000470083 BARX2Q9UMQ3 279 aaPredicted RBP14.08□□□□□ -0.16
LSM2-209ENST00000470083 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
LSM2-209ENST00000470083 TREHO43280 583 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 GLP2RO95838 553 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 ZNF543Q08ER8 600 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 BTG3Q14201 252 aaPredicted RBP14.07□□□□□ -0.16
LSM2-209ENST00000470083 HSDL1Q3SXM5 330 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 MYSM1Q5VVJ2 828 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 SUSD6Q92537 303 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 NKD2Q969F2 451 aaPredicted RBP14.07□□□□□ -0.16
LSM2-209ENST00000470083 C16orf70Q9BSU1 422 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 LRRCC1Q9C099 1032 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 NCOR2Q9Y618 2525 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 DNAH14Q0VDD8 3507 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 DMXL1Q9Y485 3027 aa14.07□□□□□ -0.16
LSM2-209ENST00000470083 NLRC5Q86WI3 1866 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 ATG2AQ2TAZ0 1938 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 ORC4O43929 436 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 SMIM10L2AP0DMW4 78 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 SMIM10L2BP0DMW5 78 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 DNAJB1P25685 340 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 NRIP1P48552 1158 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 CTDSPL2Q05D32 466 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 CELF3Q5SZQ8 465 aaKnown RBP14.06□□□□□ -0.16
LSM2-209ENST00000470083 MCTP2Q6DN12 878 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 ADSSL1Q8N142 457 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 TBC1D5Q92609 795 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
LSM2-209ENST00000470083 SPATA33Q96N06 139 aa14.06□□□□□ -0.16
LSM2-209ENST00000470083 SEC62Q99442 399 aaKnown RBP14.06□□□□□ -0.16
LSM2-209ENST00000470083 H3BRB1 525 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 ITGB1P05556 798 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 NR3C2P08235 984 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 EIF2AK2P19525 551 aaKnown RBP14.05□□□□□ -0.16
LSM2-209ENST00000470083 FAM26DQ5JW98 314 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 ARHGEF16Q5VV41 709 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 FRMD5Q7Z6J6 570 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 SPPL3Q8TCT6 385 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 TUT1Q9H6E5 874 aaKnown RBP14.05□□□□□ -0.16
LSM2-209ENST00000470083 ANAPC4Q9UJX5 808 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 ABCB11O95342 1321 aa14.05□□□□□ -0.16
LSM2-209ENST00000470083 FOXP2O15409 715 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 FGRP09769 529 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 KCNV1Q6PIU1 500 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 ZBTB33Q86T24 672 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 MCF2L2Q86YR7 1114 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 TMEM105Q8N8V8 129 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 GPATCH3Q96I76 525 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 RNPEPQ9H4A4 650 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 PXMP2Q9NR77 195 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 ZBTB40Q9NUA8 1239 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 MRPL42Q9Y6G3 142 aaKnown RBP14.04□□□□□ -0.16
LSM2-209ENST00000470083 EP300Q09472 2414 aaPredicted RBP14.04□□□□□ -0.16
LSM2-209ENST00000470083 ZNF292O60281 2723 aa14.04□□□□□ -0.16
LSM2-209ENST00000470083 MED19A0JLT2 244 aaPredicted RBP14.03□□□□□ -0.16
LSM2-209ENST00000470083 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
LSM2-209ENST00000470083 DGKIO75912 1065 aa14.03□□□□□ -0.16
LSM2-209ENST00000470083 RGS20O76081 388 aa14.03□□□□□ -0.16
LSM2-209ENST00000470083 GGPS1O95749 300 aa14.03□□□□□ -0.16
LSM2-209ENST00000470083 GNAT1P11488 350 aa14.03□□□□□ -0.16
LSM2-209ENST00000470083 GPATCH4Q5T3I0 446 aaKnown RBP14.03□□□□□ -0.16
LSM2-209ENST00000470083 TSHZ3Q63HK5 1081 aa14.03□□□□□ -0.16
LSM2-209ENST00000470083 RBM23Q86U06 439 aaKnown RBP14.03□□□□□ -0.16
LSM2-209ENST00000470083 KLHL23Q8NBE8 558 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms