RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GPR20Q99678 358 aa18.76■□□□□ 0.59
COL9A3-208ENST00000469802 PSTPIP2Q9H939 334 aa18.76■□□□□ 0.59
COL9A3-208ENST00000469802 SLC28A3Q9HAS3 691 aa18.76■□□□□ 0.59
COL9A3-208ENST00000469802 RTEL1Q9NZ71 1219 aa18.76■□□□□ 0.59
COL9A3-208ENST00000469802 BRPF3Q9ULD4 1205 aa18.76■□□□□ 0.59
COL9A3-208ENST00000469802 VCANP13611 3396 aa18.76■□□□□ 0.59
COL9A3-208ENST00000469802 H3BRB1 525 aa18.75■□□□□ 0.59
COL9A3-208ENST00000469802 NBNO60934 754 aa18.75■□□□□ 0.59
COL9A3-208ENST00000469802 ZNF200P98182 395 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-208ENST00000469802 ADGRE1Q14246 886 aa18.75■□□□□ 0.59
COL9A3-208ENST00000469802 CYFIP1Q7L576 1253 aa18.75■□□□□ 0.59
COL9A3-208ENST00000469802 SERINC5Q86VE9 423 aa18.75■□□□□ 0.59
COL9A3-208ENST00000469802 KCNB2Q92953 911 aa18.75■□□□□ 0.59
COL9A3-208ENST00000469802 GPRASP2Q96D09 838 aa18.75■□□□□ 0.59
COL9A3-208ENST00000469802 GAS2L1Q99501 681 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-208ENST00000469802 FTOQ9C0B1 505 aaKnown RBP eCLIP18.75■□□□□ 0.59
COL9A3-208ENST00000469802 TUT1Q9H6E5 874 aaKnown RBP18.75■□□□□ 0.59
COL9A3-208ENST00000469802 RBM28Q9NW13 759 aaKnown RBP18.75■□□□□ 0.59
COL9A3-208ENST00000469802 REV3LO60673 3130 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 SPTBN5Q9NRC6 3674 aaKnown RBP18.74■□□□□ 0.59
COL9A3-208ENST00000469802 NOP56O00567 594 aaKnown RBP18.74■□□□□ 0.59
COL9A3-208ENST00000469802 RCAN1P53805 252 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 KRT32Q14532 448 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 MBTPS1Q14703 1052 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 UBE2SQ16763 222 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 PPP2R2DQ66LE6 453 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 HERC6Q8IVU3 1022 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 TEX2Q8IWB9 1127 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 CCDC82Q8N4S0 544 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 USP26Q9BXU7 913 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 TELO2Q9Y4R8 837 aa18.74■□□□□ 0.59
COL9A3-208ENST00000469802 SMIM10L2AP0DMW4 78 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 SMIM10L2BP0DMW5 78 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 KCNA2P16389 499 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 ITGB5P18084 799 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 RTN1Q16799 776 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 TCTN1Q2MV58 587 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 ZNF618Q5T7W0 954 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 WWC2Q6AWC2 1192 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 TYW1BQ6NUM6 668 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 PPP1R18Q6NYC8 613 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 CNKSR3Q6P9H4 555 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 SYNE3Q6ZMZ3 975 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 HEATR3Q7Z4Q2 680 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 NLRX1Q86UT6 975 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 TRIM50Q86XT4 487 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 COL25A1Q9BXS0 654 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-208ENST00000469802 UBIAD1Q9Y5Z9 338 aa18.73■□□□□ 0.59
COL9A3-208ENST00000469802 NID2Q14112 1375 aa18.72■□□□□ 0.59
COL9A3-208ENST00000469802 C17orf102A2RUQ5 167 aa18.72■□□□□ 0.59
COL9A3-208ENST00000469802 ZBTB43O43298 467 aa18.72■□□□□ 0.59
COL9A3-208ENST00000469802 CA3P07451 260 aa18.72■□□□□ 0.59
COL9A3-208ENST00000469802 WDR5P61964 334 aaKnown RBP18.72■□□□□ 0.59
COL9A3-208ENST00000469802 GIMAP8Q8ND71 665 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-208ENST00000469802 FAM217BQ9NTX9 383 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-208ENST00000469802 SPDYE3A6NKU9 549 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 ATP9AO75110 1047 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 HMGB1P09429 215 aaKnown RBP18.71■□□□□ 0.59
COL9A3-208ENST00000469802 MKRN4PQ13434 485 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-208ENST00000469802 CCDC136Q96JN2 1154 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 CDHR1Q96JP9 859 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 RNPEPQ9H4A4 650 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 ZNF215Q9UL58 517 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-208ENST00000469802 PCDHA6Q9UN73 950 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 PCDHA8Q9Y5H6 950 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 EMSYQ7Z589 1322 aa18.71■□□□□ 0.59
COL9A3-208ENST00000469802 KLF18A0A0U1RQI7 1052 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 ABHD14A-ACY1A0A1B0GW23 586 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 GOLGA8AA7E2F4 631 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 hCG_1984214I3L0E3 225 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 ARHGEF15O94989 841 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 HSPA4P34932 840 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 KCNJ6P48051 423 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 ADAM17P78536 824 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 ZNF713Q8N859 430 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-208ENST00000469802 ATP6V0A1Q93050 837 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 RIC8AQ9NPQ8 531 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 WDR81Q562E7 1941 aa18.7■□□□□ 0.58
COL9A3-208ENST00000469802 PRRC2BQ5JSZ5 2229 aaKnown RBP18.69■□□□□ 0.58
COL9A3-208ENST00000469802 STXBP3O00186 592 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 TREHO43280 583 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 CAND2O75155 1236 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 CDC27P30260 824 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 DEFB103AP81534 67 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 TAP1Q03518 808 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 MTMR1Q13613 665 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 LMBR1Q8WVP7 490 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 JADE2Q9NQC1 790 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 COL4A6Q14031 1691 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 NLRC5Q86WI3 1866 aa18.69■□□□□ 0.58
COL9A3-208ENST00000469802 LOXHD1Q8IVV2 1947 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 RSPH10B2B2RC85 870 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 RBAK-RBAKDNI3L0D1 243 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 MAFGO15525 162 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 EFCAB14O75071 495 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 LGR5O75473 907 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 RSPH10BP0C881 870 aa18.68■□□□□ 0.58
COL9A3-208ENST00000469802 TCF7P36402 384 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-208ENST00000469802 THPOP40225 353 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms