RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 ZNF341Q9BYN7 854 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 GH2P01242 217 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 CYP2E1P05181 493 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-204ENST00000469750 MXI1P50539 228 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 APBA1Q02410 837 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 ALCAMQ13740 583 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 RPS6KA2Q15349 733 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 EEPD1Q7L9B9 569 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 AXIN2Q9Y2T1 843 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-204ENST00000469750 EIF3CLB5ME19 914 aaKnown RBP17.12■□□□□ 0.33
BRAT1-204ENST00000469750 C21orf2O43822 256 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 TTBK2Q6IQ55 1244 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 METTL23Q86XA0 190 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 UHMK1Q8TAS1 419 aaKnown RBP17.12■□□□□ 0.33
BRAT1-204ENST00000469750 CDKL2Q92772 493 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 EIF3CQ99613 913 aaKnown RBP17.12■□□□□ 0.33
BRAT1-204ENST00000469750 CCDC68Q9H2F9 335 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 SAMSN1Q9NSI8 373 aaKnown RBP17.12■□□□□ 0.33
BRAT1-204ENST00000469750 MAD1L1Q9Y6D9 718 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 A2ML1A8K2U0 1454 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 A0A087WWV3 80 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 PRDX5P30044 214 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 CRKP46108 304 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 VCXQ9H320 206 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 ENC1O14682 589 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 ZBED6P86452 979 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 DMTNQ08495 405 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 TSNAXIP1Q2TAA8 658 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 RSRC2Q7L4I2 434 aaKnown RBP17.12■□□□□ 0.33
BRAT1-204ENST00000469750 NLRP7Q8WX94 980 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 FAM133AQ8N9E0 248 aa17.12■□□□□ 0.33
BRAT1-204ENST00000469750 BUB1BO60566 1050 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-204ENST00000469750 NUF2Q9BZD4 464 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 BCAP29Q9UHQ4 241 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 MYO3BQ8WXR4 1341 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 KIF3CO14782 793 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 ADRA2BP18089 450 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 LRRC63Q05C16 580 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 Q3C1V9 767 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 MIPOL1Q8TD10 442 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 GFPT2O94808 682 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 YWHAGP61981 247 aaKnown RBP eCLIP17.11■□□□□ 0.33
BRAT1-204ENST00000469750 PRPSAP1Q14558 356 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 UBE2TQ9NPD8 197 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-204ENST00000469750 FAM114A2Q9NRY5 505 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 CYP2D6P10635 497 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 GARSP41250 739 aaKnown RBP17.11■□□□□ 0.33
BRAT1-204ENST00000469750 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 TBC1D10CQ8IV04 446 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 MED4Q9NPJ6 270 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 PIM2Q9P1W9 311 aa17.11■□□□□ 0.33
BRAT1-204ENST00000469750 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-204ENST00000469750 MED7O43513 233 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 PLCB4Q15147 1175 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 MRPL47Q9HD33 250 aaKnown RBP17.1■□□□□ 0.33
BRAT1-204ENST00000469750 GOLGA8SH3BPF8 625 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
BRAT1-204ENST00000469750 SURF1Q15526 300 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 AP1ARQ63HQ0 302 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 CCDC170Q8IYT3 715 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-204ENST00000469750 SCYL1Q96KG9 808 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
BRAT1-204ENST00000469750 PTPN22Q9Y2R2 807 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 SGK1O00141 431 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-204ENST00000469750 ATP1A2P50993 1020 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 IPO11Q9UI26 975 aaKnown RBP17.1■□□□□ 0.33
BRAT1-204ENST00000469750 DDIT3P35638 169 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 CACNB3P54284 484 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 BBS5Q8N3I7 341 aa17.1■□□□□ 0.33
BRAT1-204ENST00000469750 CYP19A1P11511 503 aaPredicted RBP17.09■□□□□ 0.33
BRAT1-204ENST00000469750 SNAP25P60880 206 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 ZBTB33Q86T24 672 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 TMEM47Q9BQJ4 181 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 DNAJC24Q6P3W2 148 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 NDST4Q9H3R1 872 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 DAAM1Q9Y4D1 1078 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 NEDD4P46934 1319 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 STK36Q9NRP7 1315 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 PGRMC1O00264 195 aaKnown RBP17.09■□□□□ 0.33
BRAT1-204ENST00000469750 ZBTB5O15062 677 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 C10orf76Q5T2E6 689 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.09■□□□□ 0.33
BRAT1-204ENST00000469750 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
BRAT1-204ENST00000469750 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms