RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 FRMPD2Q68DX3 1309 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 CCL15-CCL14A0A0B4J2E2 113 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 TEX33O43247 280 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 DDAH1O94760 285 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 NR1I3Q14994 352 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 CCL15Q16663 113 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 FAM83BQ5T0W9 1011 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 TREML2Q5T2D2 321 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 JAKMIP3Q5VZ66 844 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 DCAF4Q8WV16 495 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 ABCB6Q9NP58 842 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 RAB21Q9UL25 225 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 L1RE1Q9UN81 338 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 ABL1P00519 1130 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 BMP3P12645 472 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 CALRP27797 417 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 MOGSQ13724 837 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 GMCL1Q96IK5 515 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 ZIC5Q96T25 663 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 RPAP3Q9H6T3 665 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 AOC2O75106 756 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 PARP1P09874 1014 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CALM1P0DP23 149 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CALM2P0DP24 149 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CALM3P0DP25 149 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 SNHG28P0DPA3 235 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 APTXQ7Z2E3 356 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 BRI3BPQ8WY22 251 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 PSMB7Q99436 277 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 KCNJ14Q9UNX9 436 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 TFR2Q9UP52 801 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 MANSC4A6NHS7 340 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 WDR46O15213 610 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CCDC175P0C221 793 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 MATR3P43243 847 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 FANCBQ8NB91 859 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 MSANTD4Q8NCY6 345 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CAPZA3Q96KX2 299 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 DRC1Q96MC2 740 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 PLIN2Q99541 437 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 TANGO6Q9C0B7 1094 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CWC15Q9P013 229 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 MAD2L2Q9UI95 211 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CDC23Q9UJX2 597 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 SMAPO00193 183 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 SARSP49591 514 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 VEGFBP49765 207 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 ZNF543Q08ER8 600 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 GRM4Q14833 912 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 POSTNQ15063 836 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 ANKRD23Q86SG2 305 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 CTCFLQ8NI51 663 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 PARP14Q460N5 1801 aa11.09□□□□□ -0.63
SEMA4D-215ENST00000469653 PCNTO95613 3336 aa11.08□□□□□ -0.63
SEMA4D-215ENST00000469653 NOGQ13253 232 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 MORC3Q14149 939 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 NTRK3Q16288 839 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 PUS10Q3MIT2 529 aaKnown RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 NT5DC1Q5TFE4 455 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 GPAT2Q6NUI2 795 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 HDXQ7Z353 690 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 C11orf96Q7Z7L8 435 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 UIMC1Q96RL1 719 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 PTPN18Q99952 460 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 AGTPBP1Q9UPW5 1226 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 A0A1B0GTH6 734 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 TOB1P50616 345 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 VSNL1P62760 191 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 RBL2Q08999 1139 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 E2F4Q16254 413 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 RTN1Q16799 776 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 ASPRV1Q53RT3 343 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 C16orf87Q6PH81 154 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 MRRFQ96E11 262 aaKnown RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 FAM217BQ9NTX9 383 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 BTBD19C9JJ37 291 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 AKR1B15C9JRZ8 316 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 POLR2DO15514 142 aaKnown RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 KIF5BP33176 963 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 RCAN1P53805 252 aa11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 IKQ13123 557 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
SEMA4D-215ENST00000469653 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
SEMA4D-215ENST00000469653 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
SEMA4D-215ENST00000469653 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms