RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 MRPS9P82933 396 aaKnown RBP12.63□□□□□ -0.39
COL4A3-204ENST00000469504 IKBKEQ14164 716 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 NECTIN1Q15223 517 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 TRIM71Q2Q1W2 868 aaKnown RBP12.63□□□□□ -0.39
COL4A3-204ENST00000469504 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 PRUNE2Q8WUY3 3088 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 CHD9Q3L8U1 2897 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 MEIS2O14770 477 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 NBNO60934 754 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 RPLP2P05387 115 aaKnown RBP12.62□□□□□ -0.39
COL4A3-204ENST00000469504 MYOGP15173 224 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-204ENST00000469504 GPNMBQ14956 572 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 AAK1Q2M2I8 961 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 CENPQQ7L2Z9 268 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-204ENST00000469504 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 PPP1R13LQ8WUF5 828 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 GPRASP2Q96D09 838 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 ASB2Q96Q27 587 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 EHMT1Q9H9B1 1298 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 RBM28Q9NW13 759 aaKnown RBP12.62□□□□□ -0.39
COL4A3-204ENST00000469504 LMCD1Q9NZU5 365 aa12.62□□□□□ -0.39
COL4A3-204ENST00000469504 SPDYE3A6NKU9 549 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 hCG_1984214I3L0E3 225 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 LGR5O75473 907 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 GJB5O95377 273 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 RCAN1P53805 252 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 TAP1Q03518 808 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 ZNF618Q5T7W0 954 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 CYFIP1Q7L576 1253 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
COL4A3-204ENST00000469504 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
COL4A3-204ENST00000469504 FANCBQ8NB91 859 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 ATP6V0A1Q93050 837 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 RAD9AQ99638 391 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 GPR20Q99678 358 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 ZBED2Q9BTP6 218 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 MYL10Q9BUA6 226 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 MUC3AQ02505 3323 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 NRCAMQ92823 1304 aa12.61□□□□□ -0.39
COL4A3-204ENST00000469504 SMIM10L2AP0DMW4 78 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 SMIM10L2BP0DMW5 78 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 THPOP40225 353 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 SEMA3FQ13275 785 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 KRT32Q14532 448 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 TSGA10IPQ3SY00 556 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 RPAINQ86UA6 219 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 PIBF1Q8WXW3 757 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 PPM1EQ8WY54 764 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 APBB2Q92870 758 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 GPKOWQ92917 476 aaPredicted RBP eCLIP12.6□□□□□ -0.39
COL4A3-204ENST00000469504 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
COL4A3-204ENST00000469504 GLT8D2Q9H1C3 349 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 RNPEPQ9H4A4 650 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 COG5Q9UP83 839 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 INSL6Q9Y581 213 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
COL4A3-204ENST00000469504 SCN5AQ14524 2016 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 PLEKHA8P1O95397 391 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 AMHP03971 560 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
COL4A3-204ENST00000469504 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 TAF2Q6P1X5 1199 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 ARNTL2Q8WYA1 636 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 GBF1Q92538 1859 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
COL4A3-204ENST00000469504 FOSP01100 380 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-204ENST00000469504 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 DEFB103AP81534 67 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-204ENST00000469504 MTMR1Q13613 665 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 MBTPS1Q14703 1052 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 CCDC85BQ15834 202 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-204ENST00000469504 FAM26DQ5JW98 314 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 APOA5Q6Q788 366 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 FAM43BQ6ZT52 329 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-204ENST00000469504 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.4
COL4A3-204ENST00000469504 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 SEPT1Q8WYJ6 367 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 SEPT8Q92599 483 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 WNT8BQ93098 351 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 SAMD11Q96NU1 681 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
COL4A3-204ENST00000469504 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
COL4A3-204ENST00000469504 UBIAD1Q9Y5Z9 338 aa12.58□□□□□ -0.4
COL4A3-204ENST00000469504 CHD7Q9P2D1 2997 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms