RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 U2AF2P26368 475 aaKnown RBP eCLIP16.44■□□□□ 0.22
LIMS2-213ENST00000469300 CDC25BP30305 580 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
LIMS2-213ENST00000469300 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 CARD6Q9BX69 1037 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 LDHAP00338 332 aaKnown RBP16.44■□□□□ 0.22
LIMS2-213ENST00000469300 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 MYCBPQ99417 103 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-213ENST00000469300 GOLGA6CA6NDK9 693 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 GOLGA6BA6NDN3 693 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 GOLGA6DP0CG33 693 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 RASA3Q14644 834 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 NAA25Q14CX7 972 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 METTL23Q86XA0 190 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 GOLGA6AQ9NYA3 693 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 MAN1B1Q9UKM7 699 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 MMP14P50281 582 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 PDIA6Q15084 440 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 CCDC121Q6ZUS5 278 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 K7ERI5 159 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 ABCB4P21439 1286 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 CCDC89Q8N998 374 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 GRK7Q8WTQ7 553 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 HOXD10P28358 340 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 PRELPP51888 382 aa16.43■□□□□ 0.22
LIMS2-213ENST00000469300 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-213ENST00000469300 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 C19orf81C9J6K1 198 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 USP11P51784 963 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 QRICH1Q2TAL8 776 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 MAP7D3Q8IWC1 876 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 BHMT2Q9H2M3 363 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 KCNK9Q9NPC2 374 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 CNOT7Q9UIV1 285 aaKnown RBP16.42■□□□□ 0.22
LIMS2-213ENST00000469300 IQGAP1P46940 1657 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 RSBN1LQ6PCB5 846 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-213ENST00000469300 EEPD1Q7L9B9 569 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-213ENST00000469300 PAGE5Q96GU1 130 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 RAVER2Q9HCJ3 691 aaKnown RBP16.42■□□□□ 0.22
LIMS2-213ENST00000469300 NYAP2Q9P242 653 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 TMEM131LA2VDJ0 1609 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 MEIS1O00470 390 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 ZBTB24O43167 697 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-213ENST00000469300 TRIM50Q86XT4 487 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 FAM76AQ8TAV0 307 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 FBF1Q8TES7 1133 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 NLRP7Q8WX94 980 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 GINM1Q9NU53 330 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 LRFN2Q9ULH4 789 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 UNC13DQ70J99 1090 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 FAM151AQ8WW52 585 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 PRKAG2Q9UGJ0 569 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 SERPINA10Q9UK55 444 aa16.42■□□□□ 0.22
LIMS2-213ENST00000469300 PVALEFA0A1B0GWK0 134 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 MXI1P50539 228 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 RNASE9P60153 205 aaKnown RBP16.41■□□□□ 0.22
LIMS2-213ENST00000469300 KRT81Q14533 505 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 R3HDM1Q15032 1099 aaKnown RBP16.41■□□□□ 0.22
LIMS2-213ENST00000469300 LONRF2Q1L5Z9 754 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 RAB3IL1Q8TBN0 382 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 SMC6Q96SB8 1091 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 TRIM7Q9C029 511 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 ATP2C2O75185 946 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 AKR1B1P15121 316 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 STAT3P40763 770 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 ITIH3Q06033 890 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 DPCR1Q3MIW9 517 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 RESP18Q5W5W9 173 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.22
LIMS2-213ENST00000469300 MAP2K2P36507 400 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 MYO1EQ12965 1108 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
LIMS2-213ENST00000469300 SMIM23A6NLE4 172 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
LIMS2-213ENST00000469300 PPP1R21Q6ZMI0 780 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 CPLX4Q7Z7G2 160 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 PCDHB4Q9Y5E5 795 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 WDR46O15213 610 aaKnown RBP16.4■□□□□ 0.22
LIMS2-213ENST00000469300 SESTD1Q86VW0 696 aa16.4■□□□□ 0.22
LIMS2-213ENST00000469300 SEL1LQ9UBV2 794 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms