RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 KIAA0753Q2KHM9 967 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 CYFIP1Q7L576 1253 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 TRIM22Q8IYM9 498 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 CAGE1Q8TC20 777 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 ALG1Q9BT22 464 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 UBIAD1Q9Y5Z9 338 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 KIAA1217Q5T5P2 1943 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ESYT2A0FGR8 921 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 HAS3O00219 553 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 SORBS3O60504 671 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ZNF286BP0CG31 522 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 IFNAR1P17181 557 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 TMEM240Q5SV17 173 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 DEFB123Q8N688 67 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 CCDC148Q8NFR7 591 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 BICD2Q8TD16 824 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ZNF215Q9UL58 517 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 H3BRB1 525 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 PARNO95453 639 aaKnown RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 SEMA3FQ13275 785 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ZNF365Q70YC5 407 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 GPR20Q99678 358 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 MXRA8Q9BRK3 442 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ANO3Q9BYT9 981 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ZMYND12Q9H0C1 365 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 TUT1Q9H6E5 874 aaKnown RBP16.7■□□□□ 0.26
COMMD3-206ENST00000468179 HDAC6Q9UBN7 1215 aa16.7■□□□□ 0.26
COMMD3-206ENST00000468179 ACRP10323 421 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 GNAT1P11488 350 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 ACTN1P12814 892 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 ITGB5P18084 799 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 ZNF76P36508 570 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 SSRP1Q08945 709 aaKnown RBP16.69■□□□□ 0.26
COMMD3-206ENST00000468179 UMODL1Q5DID0 1318 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 ZNF697Q5TEC3 545 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 GDF6Q6KF10 455 aaPredicted RBP16.69■□□□□ 0.26
COMMD3-206ENST00000468179 TYW1BQ6NUM6 668 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 C16orf59Q7L2K0 433 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 AFAP1L1Q8TED9 768 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 HERVK_113Q902F9 699 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 C16orf70Q9BSU1 422 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 SLC26A6Q9BXS9 759 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 SH3GLB2Q9NR46 395 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 SCN10AQ9Y5Y9 1956 aa16.69■□□□□ 0.26
COMMD3-206ENST00000468179 CDKL5O76039 1030 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 LGALS2P05162 132 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 IQCF3P0C7M6 154 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 SREBF1P36956 1147 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 CLK2P49760 499 aaKnown RBP16.68■□□□□ 0.26
COMMD3-206ENST00000468179 PTK7Q13308 1070 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 NTRK3Q16288 839 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 PKN1Q16512 942 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 CEP55Q53EZ4 464 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 FAM177A1Q8N128 213 aaPredicted RBP16.68■□□□□ 0.26
COMMD3-206ENST00000468179 REXO1Q8N1G1 1221 aaKnown RBP16.68■□□□□ 0.26
COMMD3-206ENST00000468179 SEPT1Q8WYJ6 367 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 PHKBQ93100 1093 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
COMMD3-206ENST00000468179 TMEM265A0A087WTH1 108 aa16.67■□□□□ 0.26
COMMD3-206ENST00000468179 C17orf102A2RUQ5 167 aa16.67■□□□□ 0.26
COMMD3-206ENST00000468179 KCNA2P16389 499 aa16.67■□□□□ 0.26
COMMD3-206ENST00000468179 NIPA1Q7RTP0 329 aa16.67■□□□□ 0.26
COMMD3-206ENST00000468179 TNPO1Q92973 898 aaKnown RBP16.67■□□□□ 0.26
COMMD3-206ENST00000468179 SCLYQ96I15 445 aa16.67■□□□□ 0.26
COMMD3-206ENST00000468179 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
COMMD3-206ENST00000468179 SELPP16109 830 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 ARHGAP4P98171 946 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 SP4Q02446 784 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 RBL2Q08999 1139 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 UTP14CQ5TAP6 766 aaKnown RBP16.66■□□□□ 0.26
COMMD3-206ENST00000468179 RASIP1Q5U651 963 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 JAKMIP3Q5VZ66 844 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 PPP1R13LQ8WUF5 828 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 FTOQ9C0B1 505 aaKnown RBP eCLIP16.66■□□□□ 0.26
COMMD3-206ENST00000468179 SLKQ9H2G2 1235 aaPredicted RBP16.66■□□□□ 0.26
COMMD3-206ENST00000468179 KCNH7Q9NS40 1196 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 TMEM260Q9NX78 707 aa16.66■□□□□ 0.26
COMMD3-206ENST00000468179 NFASCO94856 1347 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 MEIS1O00470 390 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 ATP9AO75110 1047 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 DEXIO95424 95 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 CYP3A4P08684 503 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 SMIM10L2AP0DMW4 78 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 SMIM10L2BP0DMW5 78 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 TCF7P36402 384 aaPredicted RBP16.65■□□□□ 0.26
COMMD3-206ENST00000468179 NLRP5P59047 1200 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 LRRC8DQ7L1W4 858 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 OTOP2Q7RTS6 562 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms