RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 HIPK3Q9H422 1215 aa17.35■□□□□ 0.37
ATG4B-215ENST00000468018 SH3GLB2Q9NR46 395 aa17.35■□□□□ 0.37
ATG4B-215ENST00000468018 GTF2IRD1Q9UHL9 959 aa17.35■□□□□ 0.37
ATG4B-215ENST00000468018 LAMA2P24043 3122 aaKnown RBP17.35■□□□□ 0.37
ATG4B-215ENST00000468018 SORBS3O60504 671 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 PPFIA3O75145 1194 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 DEXIO95424 95 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 LGALS2P05162 132 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 CYP3A4P08684 503 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 CYP2C18P33260 490 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 AK2P54819 239 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.371e-10■■□□□ 12.8
ATG4B-215ENST00000468018 MTMR1Q13613 665 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 MFSD10Q14728 455 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 GDF6Q6KF10 455 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-215ENST00000468018 FAM177A1Q8N128 213 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-215ENST00000468018 GIMAP8Q8ND71 665 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-215ENST00000468018 CCDC148Q8NFR7 591 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 CYP2W1Q8TAV3 490 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 GBF1Q92538 1859 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 C6orf50Q9HD87 102 aa17.34■□□□□ 0.37
ATG4B-215ENST00000468018 MEIS1O00470 390 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 CYP2C9P11712 490 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 CSF2RAP15509 400 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 GNA11P29992 359 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 AKAP17AQ02040 695 aaKnown RBP17.33■□□□□ 0.36
ATG4B-215ENST00000468018 RBL2Q08999 1139 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 ANKRD1Q15327 319 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 KIAA0753Q2KHM9 967 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 CEP55Q53EZ4 464 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 RASIP1Q5U651 963 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 MCTP2Q6DN12 878 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 REXO1Q8N1G1 1221 aaKnown RBP17.33■□□□□ 0.36
ATG4B-215ENST00000468018 TMEM199Q8N511 208 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 KCNH7Q9NS40 1196 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 VPS54Q9P1Q0 977 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 HDAC6Q9UBN7 1215 aa17.33■□□□□ 0.36
ATG4B-215ENST00000468018 MYH9P35579 1960 aaKnown RBP17.33■□□□□ 0.36
ATG4B-215ENST00000468018 NFASCO94856 1347 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 IGLV3-22A0A075B6J6 115 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 M0R2N6 131 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 EDIL3O43854 480 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 ARHGAP4P98171 946 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
ATG4B-215ENST00000468018 STK3Q13188 491 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 HIC1Q14526 733 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 NPY5RQ15761 445 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 PTGISQ16647 500 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 FAM47CQ5HY64 1035 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 TMEM240Q5SV17 173 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 JAKMIP3Q5VZ66 844 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 NIPA1Q7RTP0 329 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 TRIM22Q8IYM9 498 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.32■□□□□ 0.365e-7■□□□□ 10.9
ATG4B-215ENST00000468018 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
ATG4B-215ENST00000468018 PTPRSQ13332 1948 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 GSTTP1A0A1W2PQM5 241 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 FAM86B1E9PN63 330 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 H3BRB1 525 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 NOP56O00567 594 aaKnown RBP17.31■□□□□ 0.36
ATG4B-215ENST00000468018 CPLX1O14810 134 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 CTDNEP1O95476 244 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 DHX38Q92620 1227 aaKnown RBP17.31■□□□□ 0.36
ATG4B-215ENST00000468018 KIF2CQ99661 725 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 ALG1Q9BT22 464 aa17.31■□□□□ 0.36
ATG4B-215ENST00000468018 SLKQ9H2G2 1235 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-215ENST00000468018 TUT1Q9H6E5 874 aaKnown RBP17.31■□□□□ 0.36
ATG4B-215ENST00000468018 LARGE1O95461 756 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 ARP10275 920 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 CIITAP33076 1130 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 ME3Q16798 604 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 CPLX2Q6PUV4 134 aaKnown RBP17.3■□□□□ 0.36
ATG4B-215ENST00000468018 DAGLBQ8NCG7 672 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 CAGE1Q8TC20 777 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 RASGRP4Q8TDF6 673 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 AGO4Q9HCK5 861 aaKnown RBP17.3■□□□□ 0.36
ATG4B-215ENST00000468018 SIP14410 1827 aa17.3■□□□□ 0.36
ATG4B-215ENST00000468018 CDKL5O76039 1030 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 TCF7P36402 384 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-215ENST00000468018 CCL23P55773 120 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 ADAM17P78536 824 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 ITGB3BPQ13352 177 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-215ENST00000468018 TRIM71Q2Q1W2 868 aaKnown RBP17.29■□□□□ 0.36
ATG4B-215ENST00000468018 PSRC1Q6PGN9 363 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-215ENST00000468018 TRIM50Q86XT4 487 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 C7orf31Q8N865 590 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 SEPT1Q8WYJ6 367 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 GTF3C6Q969F1 213 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 LENG9Q96B70 501 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 SCLYQ96I15 445 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 AIFM3Q96NN9 605 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
ATG4B-215ENST00000468018 EMSYQ7Z589 1322 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 DHX15O43143 795 aaKnown RBP17.28■□□□□ 0.36
ATG4B-215ENST00000468018 LGR5O75473 907 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 ATG7O95352 703 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms