RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 BAATQ14032 418 aaPredicted RBP13.9□□□□□ -0.18
VPS26A-204ENST00000467852 MFSD10Q14728 455 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 DGKDQ16760 1214 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 KIAA0753Q2KHM9 967 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 SLC9C2Q5TAH2 1124 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 FAM160B2Q86V87 743 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 LCORLQ8N3X6 602 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 VN1R2Q8NFZ6 395 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 NECTIN4Q96NY8 510 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 MEIS3Q99687 375 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
VPS26A-204ENST00000467852 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 FBXL21Q9UKT6 434 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 GREB1LQ9C091 1923 aaPredicted RBP13.9□□□□□ -0.18
VPS26A-204ENST00000467852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.89□□□□□ -0.19
VPS26A-204ENST00000467852 B4DLN1 442 aa13.89□□□□□ -0.19
VPS26A-204ENST00000467852 ARP10275 920 aa13.89□□□□□ -0.19
VPS26A-204ENST00000467852 HOXB8P17481 243 aaPredicted RBP13.89□□□□□ -0.19
VPS26A-204ENST00000467852 RFX1P22670 979 aa13.89□□□□□ -0.19
VPS26A-204ENST00000467852 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
VPS26A-204ENST00000467852 DUSP6Q16828 381 aa13.89□□□□□ -0.19
VPS26A-204ENST00000467852 TMEM184AQ6ZMB5 413 aa13.89□□□□□ -0.19
VPS26A-204ENST00000467852 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
VPS26A-204ENST00000467852 ZNF689Q96CS4 500 aaPredicted RBP13.89□□□□□ -0.19
VPS26A-204ENST00000467852 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
VPS26A-204ENST00000467852 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
VPS26A-204ENST00000467852 KIAA1671Q9BY89 1806 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 PTPDC1A2A3K4 754 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 GH1P01241 217 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 GNAI3P08754 354 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
VPS26A-204ENST00000467852 SLFN13Q68D06 897 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 CES5AQ6NT32 575 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 SYCE2Q6PIF2 218 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 SERINC5Q86VE9 423 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 SIX5Q8N196 739 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 CRIPAKQ8N1N5 446 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 MKL1Q969V6 931 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 ERVK-5Q9HDB9 667 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 CCPG1Q9ULG6 757 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 USP18Q9UMW8 372 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 CACNA1IQ9P0X4 2223 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 PLXNA4Q9HCM2 1894 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 TTC3P53804 2025 aa13.88□□□□□ -0.19
VPS26A-204ENST00000467852 GCN1Q92616 2671 aaKnown RBP13.87□□□□□ -0.19
VPS26A-204ENST00000467852 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 ARIH2O95376 493 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 PDE6AP16499 860 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
VPS26A-204ENST00000467852 TDRD5Q8NAT2 981 aaKnown RBP13.87□□□□□ -0.19
VPS26A-204ENST00000467852 GMCL1P1Q8NEA9 526 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 POMKQ9H5K3 350 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 ARMT1Q9H993 441 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 MRPL42Q9Y6G3 142 aaKnown RBP13.87□□□□□ -0.19
VPS26A-204ENST00000467852 ZNF532Q9HCE3 1301 aa13.87□□□□□ -0.19
VPS26A-204ENST00000467852 HAS3O00219 553 aa13.86□□□□□ -0.19
VPS26A-204ENST00000467852 PRKAB2O43741 272 aa13.86□□□□□ -0.19
VPS26A-204ENST00000467852 PROS1P07225 676 aa13.86□□□□□ -0.19
VPS26A-204ENST00000467852 TBC1D8BQ0IIM8 1120 aa13.86□□□□□ -0.19
VPS26A-204ENST00000467852 TPRNQ4KMQ1 711 aa13.86□□□□□ -0.19
VPS26A-204ENST00000467852 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
VPS26A-204ENST00000467852 DBNLQ9UJU6 430 aaKnown RBP13.86□□□□□ -0.19
VPS26A-204ENST00000467852 CAND2O75155 1236 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 DGKIO75912 1065 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 CTSHP09668 335 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 CALML3P27482 149 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 MTHFRP42898 656 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 UBE3AQ05086 875 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 ITIH3Q06033 890 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 ARHGAP1Q07960 439 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 LY6KQ17RY6 165 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 PDE12Q6L8Q7 609 aaKnown RBP13.85□□□□□ -0.19
VPS26A-204ENST00000467852 C1orf210Q8IVY1 113 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 CMTR2Q8IYT2 770 aaKnown RBP13.85□□□□□ -0.19
VPS26A-204ENST00000467852 ATP6V0A1Q93050 837 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 OSBPL7Q9BZF2 842 aa13.85□□□□□ -0.19
VPS26A-204ENST00000467852 CCDC8Q9H0W5 538 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-204ENST00000467852 CNOT1A5YKK6 2376 aaKnown RBP13.85□□□□□ -0.19
VPS26A-204ENST00000467852 F2P00734 622 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 RASA1P20936 1047 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 EDNRBP24530 442 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 SNAP25P60880 206 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 TDGQ13569 410 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 KCNC3Q14003 757 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 LLGL2Q6P1M3 1020 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 CCDC62Q6P9F0 684 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 HS6ST3Q8IZP7 471 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 DNERQ8NFT8 737 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 RASGRP4Q8TDF6 673 aa13.84□□□□□ -0.19
VPS26A-204ENST00000467852 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 ENPP3O14638 875 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 SPTLC1O15269 473 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 PLA2G6O60733 806 aa13.83□□□□□ -0.2
VPS26A-204ENST00000467852 TTLL1O95922 423 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms