RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
HDAC3-203ENST00000467533 KIAA2013Q8IYS2 634 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 KREMEN2Q8NCW0 462 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 PPTC7Q8NI37 304 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 P2RX5Q93086 422 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 MFSD1Q9H3U5 465 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 RC3H2Q9HBD1 1191 aaKnown RBP12.06□□□□□ -0.48
HDAC3-203ENST00000467533 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
HDAC3-203ENST00000467533 GPAA1O43292 621 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 SORBS3O60504 671 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 NMT2O60551 498 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 CAND2O75155 1236 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 ITGB1P05556 798 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 GNAT2P19087 354 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 PUM1Q14671 1186 aaKnown RBP eCLIP12.05□□□□□ -0.48
HDAC3-203ENST00000467533 BTNL9Q6UXG8 535 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 UBALD2Q8IYN6 164 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 POF1BQ8WVV4 589 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 SUSD6Q92537 303 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 EMID1Q96A84 441 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-203ENST00000467533 NEK1Q96PY6 1258 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 PCDHGC5Q9Y5F6 944 aa12.05□□□□□ -0.48
HDAC3-203ENST00000467533 TREHO43280 583 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 BRD1O95696 1058 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 STXBP2Q15833 593 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 USH1GQ495M9 461 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 SPPL3Q8TCT6 385 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 APPBP2Q92624 585 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 OSBP2Q969R2 916 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 HINFPQ9BQA5 517 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 TLE6Q9H808 572 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 DDX41Q9UJV9 622 aaKnown RBP12.04□□□□□ -0.48
HDAC3-203ENST00000467533 MRPL42Q9Y6G3 142 aaKnown RBP12.04□□□□□ -0.48
HDAC3-203ENST00000467533 NCOR2Q9Y618 2525 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 WDR19Q8NEZ3 1342 aa12.04□□□□□ -0.48
HDAC3-203ENST00000467533 WDR87Q6ZQQ6 2873 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 PER2O15055 1255 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 SRGAP2BP0DMP2 458 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 RBM10P98175 930 aaKnown RBP12.03□□□□□ -0.48
HDAC3-203ENST00000467533 PPARAQ07869 468 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 NAALADL2Q58DX5 795 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 KLHL23Q8NBE8 558 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 NSUN6Q8TEA1 469 aaKnown RBP12.03□□□□□ -0.48
HDAC3-203ENST00000467533 ZNF689Q96CS4 500 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-203ENST00000467533 APOL5Q9BWW9 433 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 NACAP1Q9BZK3 213 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 NAPBQ9H115 298 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 IL17RBQ9NRM6 502 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
HDAC3-203ENST00000467533 FSD2A1L4K1 749 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 M0R2C6 588 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 LMNAP02545 664 aaKnown RBP12.02□□□□□ -0.49
HDAC3-203ENST00000467533 SMIM10L2AP0DMW4 78 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 SMIM10L2BP0DMW5 78 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 GHRP10912 638 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 HOXD8P13378 290 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-203ENST00000467533 EIF2AK2P19525 551 aaKnown RBP12.02□□□□□ -0.49
HDAC3-203ENST00000467533 PAN2Q504Q3 1202 aaKnown RBP12.02□□□□□ -0.49
HDAC3-203ENST00000467533 CMTR2Q8IYT2 770 aaKnown RBP12.02□□□□□ -0.49
HDAC3-203ENST00000467533 FLCNQ8NFG4 579 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 MICAL1Q8TDZ2 1067 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 SPATA33Q96N06 139 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 TAAR1Q96RJ0 339 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 SMOC2Q9H3U7 446 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
HDAC3-203ENST00000467533 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
HDAC3-203ENST00000467533 PPFIA4O75335 1185 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 DGKIO75912 1065 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 CLCN5P51795 746 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 ANGPT1Q15389 498 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 HSDL1Q3SXM5 330 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 ARHGEF16Q5VV41 709 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 VN1R2Q8NFZ6 395 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 ATP8B4Q8TF62 1192 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 IWS1Q96ST2 819 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
HDAC3-203ENST00000467533 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-203ENST00000467533 DNAH14Q0VDD8 3507 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 MYH6P13533 1939 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 TTC3P53804 2025 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 H3BRB1 525 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 RANBP6O60518 1105 aaKnown RBP12□□□□□ -0.49
HDAC3-203ENST00000467533 PPFIA3O75145 1194 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 EIF3JO75822 258 aaKnown RBP12□□□□□ -0.49
HDAC3-203ENST00000467533 GGPS1O95749 300 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 GNAT1P11488 350 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 RLBP1P12271 317 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 HOXC8P31273 242 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 TECP42680 631 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 DUSP6Q16828 381 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 ST3GAL2Q16842 350 aa12□□□□□ -0.49
HDAC3-203ENST00000467533 CWF19L1Q69YN2 538 aaKnown RBP12□□□□□ -0.49
HDAC3-203ENST00000467533 KBTBD3Q8NAB2 608 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms