RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 IFT88Q13099 833 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 FBXO33Q7Z6M2 555 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.334e-6■■□□□ 14.2
CHD1L-205ENST00000467213 MTMR9Q96QG7 549 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 NMT2O60551 498 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 TLR2O60603 784 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-205ENST00000467213 ANKRD20A8PQ5CZ79 823 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 PARP9Q8IXQ6 854 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 FUKQ8N0W3 1084 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 RASGEF1CQ8N431 466 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 TATDN2Q93075 761 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 BAZ2BQ9UIF8 2168 aaKnown RBP17.09■□□□□ 0.33
CHD1L-205ENST00000467213 GSTA1P08263 222 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 ELF1P32519 619 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 ZNF844Q08AG5 666 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 GRB10Q13322 594 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 RNF187Q5TA31 235 aaPredicted RBP17.09■□□□□ 0.33
CHD1L-205ENST00000467213 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
CHD1L-205ENST00000467213 TAF4BQ92750 862 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 C6orf50Q9HD87 102 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
CHD1L-205ENST00000467213 TTC7AQ9ULT0 858 aaPredicted RBP17.09■□□□□ 0.33
CHD1L-205ENST00000467213 MYH4Q9Y623 1939 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 KLRC1P26715 233 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 SEC24CP53992 1094 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 CYB5D1Q6P9G0 228 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 RAB34Q9BZG1 259 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 INTUQ9ULD6 942 aa17.09■□□□□ 0.33
CHD1L-205ENST00000467213 A0A0A6YYK5 440 aaPredicted RBP17.08■□□□□ 0.33
CHD1L-205ENST00000467213 A0A0G2JS52 829 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 MYMKA6NI61 221 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.33
CHD1L-205ENST00000467213 BUB1O43683 1085 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 ERVK-9P63128 1117 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 UAP1Q16222 522 aaPredicted RBP17.08■□□□□ 0.33
CHD1L-205ENST00000467213 TMEM119Q4V9L6 283 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 FAM47AQ5JRC9 791 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 MAATS1Q7Z4T9 603 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 CCDC114Q96M63 670 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 RABEP2Q9H5N1 569 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.33
CHD1L-205ENST00000467213 RGL2O15211 777 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 MGRN1O60291 552 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 KIF4AO95239 1232 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 NPEPPSP55786 919 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
CHD1L-205ENST00000467213 RPS6KA1Q15418 735 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 PPP2R5EQ16537 467 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 CACNA2D3Q8IZS8 1091 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 RAD54LQ92698 747 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 SEC16BQ96JE7 1060 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 PSMB7Q99436 277 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 OSBPL7Q9BZF2 842 aa17.08■□□□□ 0.32
CHD1L-205ENST00000467213 CYTH3O43739 400 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 GUCY2FP51841 1108 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 SLC35G1Q2M3R5 365 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
CHD1L-205ENST00000467213 SLFN11Q7Z7L1 901 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 HINFPQ9BQA5 517 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
CHD1L-205ENST00000467213 C12orf60Q5U649 245 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 TRIM59Q8IWR1 403 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 LRRC57Q8N9N7 239 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 TLCD1Q96CP7 247 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
CHD1L-205ENST00000467213 PLIN2Q99541 437 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 FBXL5Q9UKA1 691 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 NENFQ9UMX5 172 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
CHD1L-205ENST00000467213 NF2P35240 595 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 RIPK1Q13546 671 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 CRYMQ14894 314 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 CRELD2Q6UXH1 353 aaPredicted RBP17.06■□□□□ 0.32
CHD1L-205ENST00000467213 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 CROCCP2Q86T23 111 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 MYOCDQ8IZQ8 938 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 CCT6BQ92526 530 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.321e-9■□□□□ 10.4
CHD1L-205ENST00000467213 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
CHD1L-205ENST00000467213 MYH7BA7E2Y1 1941 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 ESYT3A0FGR9 886 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 PGRMC1O00264 195 aaKnown RBP17.06■□□□□ 0.32
CHD1L-205ENST00000467213 CCNT1O60563 726 aaKnown RBP17.06■□□□□ 0.32
CHD1L-205ENST00000467213 ERCC3P19447 782 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 MRPS25P82663 173 aaKnown RBP17.06■□□□□ 0.32
CHD1L-205ENST00000467213 MECOMQ03112 1051 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 TMEM266Q2M3C6 531 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 GKAP1Q5VSY0 366 aaPredicted RBP17.06■□□□□ 0.32
CHD1L-205ENST00000467213 LMBR1Q8WVP7 490 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
CHD1L-205ENST00000467213 SUFUQ9UMX1 484 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms