RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 LMO1P25800 156 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 EIF6P56537 245 aaKnown RBP6.82□□□□□ -1.32
XRN1-206ENST00000467077 COL9A2Q14055 689 aaPredicted RBP6.82□□□□□ -1.32
XRN1-206ENST00000467077 EMC4Q5J8M3 183 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 AGBL4Q5VU57 503 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 GTF2IRD2BQ6EKJ0 949 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 GTF2IRD2Q86UP8 949 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 REXO1L1PQ8IX06 675 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 FUKQ8N0W3 1084 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 PHOSPHO1Q8TCT1 267 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 FRS2Q8WU20 508 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 PPP1R14AQ96A00 147 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 NEIL1Q96FI4 390 aaPredicted RBP6.82□□□□□ -1.32
XRN1-206ENST00000467077 PLEKHG4BQ96PX9 1271 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 CYP26B1Q9NR63 512 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 MEFVO15553 781 aaPredicted RBP6.81□□□□□ -1.32
XRN1-206ENST00000467077 DGKIO75912 1065 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 CSF2RBP32927 897 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 RAC3P60763 192 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
XRN1-206ENST00000467077 KIAA1211LQ6NV74 962 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 DPY19L2P1Q6NXN4 242 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 POLNQ7Z5Q5 900 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 OR6P1Q8NGX9 317 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 NPLOC4Q8TAT6 608 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 AJUBAQ96IF1 538 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 APBA2Q99767 749 aa6.81□□□□□ -1.32
XRN1-206ENST00000467077 H7BY64 318 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 RAD17O75943 681 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 C1SP09871 688 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 PPP2R5EQ16537 467 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 TRIM59Q8IWR1 403 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 TMEM87AQ8NBN3 555 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 NKX2-4Q9H2Z4 354 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 EPB41L1Q9H4G0 881 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 WASF3Q9UPY6 502 aa6.8□□□□□ -1.32
XRN1-206ENST00000467077 TADA3O75528 432 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 MAKP20794 623 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 ZNF76P36508 570 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 TUBA3CQ13748 450 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 USP10Q14694 798 aaKnown RBP6.79□□□□□ -1.32
XRN1-206ENST00000467077 PHF19Q5T6S3 580 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 TUBA3EQ6PEY2 450 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 VHLLQ6RSH7 139 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 MRGPRGQ86SM5 289 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 LDLRAD3Q86YD5 345 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 DTX3Q8N9I9 347 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 RBPJLQ9UBG7 517 aa6.79□□□□□ -1.32
XRN1-206ENST00000467077 TRIM48Q8IWZ4 208 aa6.78□□□□□ -1.32
XRN1-206ENST00000467077 ZNF513Q8N8E2 541 aaPredicted RBP6.78□□□□□ -1.32
XRN1-206ENST00000467077 ZNF483Q8TF39 744 aaPredicted RBP6.78□□□□□ -1.32
XRN1-206ENST00000467077 CACTINQ8WUQ7 758 aaKnown RBP6.78□□□□□ -1.32
XRN1-206ENST00000467077 SMOC1Q9H4F8 434 aa6.78□□□□□ -1.32
XRN1-206ENST00000467077 CLDND1Q9NY35 253 aa6.78□□□□□ -1.32
XRN1-206ENST00000467077 HSPBP1Q9NZL4 362 aa6.78□□□□□ -1.32
XRN1-206ENST00000467077 KRIT1O00522 736 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 KNG1P01042 644 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 ACRV1P26436 265 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 ZNF143P52747 638 aaPredicted RBP6.77□□□□□ -1.33
XRN1-206ENST00000467077 LSAMPQ13449 338 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 CCDC103Q8IW40 242 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.77□□□□□ -1.33
XRN1-206ENST00000467077 BCL2L13Q9BXK5 485 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 ZFP69BQ9UJL9 534 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 FBXL7Q9UJT9 491 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 PCDHGB7Q9Y5F8 929 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 PCDHA2Q9Y5H9 948 aa6.77□□□□□ -1.33
XRN1-206ENST00000467077 SNRPB2P08579 225 aaKnown RBP6.76□□□□□ -1.33
XRN1-206ENST00000467077 HNRNPA0Q13151 305 aaKnown RBP6.76□□□□□ -1.33
XRN1-206ENST00000467077 ZNF394Q53GI3 561 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 CYP4F22Q6NT55 531 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 TTLL11Q8NHH1 800 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 VOPP1Q96AW1 172 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 NAF1Q96HR8 494 aaKnown RBP6.76□□□□□ -1.33
XRN1-206ENST00000467077 OR14A2Q96R54 314 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 MMRN2Q9H8L6 949 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 SLC30A1Q9Y6M5 507 aa6.76□□□□□ -1.33
XRN1-206ENST00000467077 H0Y858 1186 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 U2SURPO15042 1029 aaKnown RBP6.75□□□□□ -1.33
XRN1-206ENST00000467077 CR2P20023 1033 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 ECI1P42126 302 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 GIPRP48546 466 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 ATXN1P54253 815 aaKnown RBP6.75□□□□□ -1.33
XRN1-206ENST00000467077 SKIDA1Q1XH10 827 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 GIPC2Q8TF65 315 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 GINM1Q9NU53 330 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 ARHGAP20Q9P2F6 1191 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 ASH2LQ9UBL3 628 aa6.75□□□□□ -1.33
XRN1-206ENST00000467077 CDC14BO60729 498 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 RAMP2O60895 175 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 GLRBP48167 497 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 ACBD5Q5T8D3 534 aaPredicted RBP6.74□□□□□ -1.33
XRN1-206ENST00000467077 PROSER1Q86XN7 944 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 PPIL6Q8IXY8 311 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 RCBTB1Q8NDN9 531 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms