RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 HSP90AA2PQ14568 343 aaPredicted RBP6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 MCF2L2Q86YR7 1114 aa6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 TTLL11Q8NHH1 800 aa6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 MBD6Q96DN6 1003 aa6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 TINF2Q9BSI4 451 aa6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 JAM3Q9BX67 310 aa6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 NUB1Q9Y5A7 615 aa6.38□□□□□ -1.39
CHMP2B-202ENST00000466696 IQCA1LA6NCM1 817 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 TNFRSF1AP19438 455 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 DDR2Q16832 855 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 PKN3Q6P5Z2 889 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 TMC5Q6UXY8 1006 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 USP53Q70EK8 1073 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 LIMS2Q7Z4I7 341 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 KLHL36Q8N4N3 616 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 PIP4K2CQ8TBX8 421 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 HNRNPLLQ8WVV9 542 aaKnown RBP6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 ZCCHC14Q8WYQ9 949 aaKnown RBP6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 PHF20Q9BVI0 1012 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 BARX1Q9HBU1 254 aaPredicted RBP6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 ST7Q9NRC1 585 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 PPP4R1LQ9P1A2 415 aa6.37□□□□□ -1.39
CHMP2B-202ENST00000466696 NPEPPSL1A6NEC2 478 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 DNAJA1P31689 397 aaKnown RBP6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 PPP2CBP62714 309 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 PPP2CAP67775 309 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 VASNQ6EMK4 673 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 ANKS3Q6ZW76 656 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 KBTBD2Q8IY47 623 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 CELF2-AS1Q8N7Q2 184 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 DCAF4Q8WV16 495 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 WASF3Q9UPY6 502 aa6.36□□□□□ -1.39
CHMP2B-202ENST00000466696 SLC27A2O14975 620 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 MATN3O15232 486 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 MSCO60682 206 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 FGFR1P11362 822 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 SPIRE1Q08AE8 756 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 NFATC3Q12968 1075 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 KIZQ2M2Z5 673 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 ARHGEF18Q6ZSZ5 1173 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 OTOP3Q7RTS5 596 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 KISS1RQ969F8 398 aaPredicted RBP6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 ZFYVE21Q9BQ24 234 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 AARSD1Q9BTE6 412 aaKnown RBP6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 DLL4Q9NR61 685 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 ST6GALNAC2Q9UJ37 374 aa6.35□□□□□ -1.39
CHMP2B-202ENST00000466696 CHGBP05060 677 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 GRK2P25098 689 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 GRK3P35626 688 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 EPHB4P54760 987 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 ZXDAP98168 799 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 LBX2Q6XYB7 198 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 CIR1Q86X95 450 aaPredicted RBP6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 PROSER1Q86XN7 944 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 DTX3Q8N9I9 347 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 IGDCC4Q8TDY8 1250 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 CLEC4DQ8WXI8 215 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 GMLQ99445 158 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 JADE2Q9NQC1 790 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 PPARGC1AQ9UBK2 798 aaKnown RBP6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
CHMP2B-202ENST00000466696 PRODHO43272 600 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 KLF4O43474 513 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 B4GALT4O60513 344 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 GNAT1P11488 350 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 GRIN1Q05586 938 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 TUSC3Q13454 348 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 DPH6Q7L8W6 267 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 ST13P5Q8NFI4 369 aaPredicted RBP6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 UHMK1Q8TAS1 419 aaKnown RBP6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 CDK5RAP1Q96SZ6 601 aaKnown RBP6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 PDGFDQ9GZP0 370 aaPredicted RBP6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 RBPJLQ9UBG7 517 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
CHMP2B-202ENST00000466696 FBXO21O94952 628 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 PABPC1P11940 636 aaKnown RBP6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 COL6A1P12109 1028 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 FAHP16930 419 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 GPR85P60893 370 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 ICAM4Q14773 271 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 SMAD2Q15796 467 aaKnown RBP6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 PAN2Q504Q3 1202 aaKnown RBP6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 SLFN13Q68D06 897 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 NSMFQ6X4W1 530 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 ARHGEF4Q9NR80 690 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 ADAM29Q9UKF5 820 aa6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 CCDC9Q9Y3X0 531 aaKnown RBP6.32□□□□□ -1.4
CHMP2B-202ENST00000466696 TRAV20A0A0B4J274 112 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 GPR42O15529 346 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 KLHL18O94889 574 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 CKMP06732 381 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 ENO2P09104 434 aaPredicted RBP6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 STYK1Q6J9G0 422 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 KCNT2Q6UVM3 1135 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms