RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 PLAGL2Q9UPG8 496 aa17.33■□□□□ 0.36
HMGXB4-206ENST00000466438 CAND2O75155 1236 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 GLP2RO95838 553 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 GNAT2P19087 354 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 ZBTB33Q86T24 672 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 P2RX5Q93086 422 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 RMDN1Q96DB5 314 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
HMGXB4-206ENST00000466438 NCOR2Q9Y618 2525 aa17.31■□□□□ 0.36
HMGXB4-206ENST00000466438 NRIP1P48552 1158 aa17.31■□□□□ 0.36
HMGXB4-206ENST00000466438 SUSD6Q92537 303 aa17.31■□□□□ 0.36
HMGXB4-206ENST00000466438 OSBP2Q969R2 916 aa17.31■□□□□ 0.36
HMGXB4-206ENST00000466438 OSBPL7Q9BZF2 842 aa17.31■□□□□ 0.36
HMGXB4-206ENST00000466438 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
HMGXB4-206ENST00000466438 WDR87Q6ZQQ6 2873 aa17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 WDR19Q8NEZ3 1342 aa17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 KIAA1217Q5T5P2 1943 aa17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 APPP05067 770 aa17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 HOXD8P13378 290 aaPredicted RBP17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 DNAJB1P25685 340 aa17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 LAMC2Q13753 1193 aa17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 FTSJ3Q8IY81 847 aaKnown RBP17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 APPBP2Q92624 585 aa17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
HMGXB4-206ENST00000466438 ZFHX4Q86UP3 3567 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 GPAA1O43292 621 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 CTSHP09668 335 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 BTG3Q14201 252 aaPredicted RBP17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 NAALADL2Q58DX5 795 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 IFNL3Q8IZI9 196 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 RGS22Q8NE09 1264 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 ATP6V0A1Q93050 837 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 ZNF689Q96CS4 500 aaPredicted RBP17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 CNTNAP3BQ96NU0 1288 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 CNTNAP3Q9BZ76 1288 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
HMGXB4-206ENST00000466438 C17orf102A2RUQ5 167 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 NMT2O60551 498 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 PPFIA4O75335 1185 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 HOXC8P31273 242 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 STXBP2Q15833 593 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 UBALD2Q8IYN6 164 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 SPPL3Q8TCT6 385 aa17.28■□□□□ 0.36
HMGXB4-206ENST00000466438 PATL2C9JE40 543 aaKnown RBP17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 ITGB1P05556 798 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 NOVP48745 357 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 MTMR3Q13615 1198 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 ASTLQ6HA08 431 aaPredicted RBP17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 KREMEN2Q8NCW0 462 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 NSUN6Q8TEA1 469 aaKnown RBP17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 IWS1Q96ST2 819 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 NACAP1Q9BZK3 213 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 MAF1Q9H063 256 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
HMGXB4-206ENST00000466438 FRMPD2Q68DX3 1309 aaPredicted RBP17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 TREHO43280 583 aa17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 PPARAQ07869 468 aa17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 PUM1Q14671 1186 aaKnown RBP eCLIP17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 POF1BQ8WVV4 589 aa17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 GPCPD1Q9NPB8 672 aa17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 SORCS3Q9UPU3 1222 aa17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 TPRP12270 2363 aaKnown RBP17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 EP300Q09472 2414 aaPredicted RBP17.26■□□□□ 0.35
HMGXB4-206ENST00000466438 CACNA1GO43497 2377 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 MS4A1P11836 297 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 RLBP1P12271 317 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 KBTBD3Q8NAB2 608 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 ATP8B4Q8TF62 1192 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 NEK1Q96PY6 1258 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 TAAR1Q96RJ0 339 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 C16orf70Q9BSU1 422 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 TLE6Q9H808 572 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 MRPL42Q9Y6G3 142 aaKnown RBP17.25■□□□□ 0.35
HMGXB4-206ENST00000466438 M0R2C6 588 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 EIF3JO75822 258 aaKnown RBP17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 DGKIO75912 1065 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 BRD1O95696 1058 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 SMIM10L2AP0DMW4 78 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 SMIM10L2BP0DMW5 78 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 CLCN5P51795 746 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 FAM26DQ5JW98 314 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 KLHL23Q8NBE8 558 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 SYTL5Q8TDW5 730 aaPredicted RBP17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 NAPBQ9H115 298 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 KIAA1671Q9BY89 1806 aa17.24■□□□□ 0.35
HMGXB4-206ENST00000466438 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 RNF113AO15541 343 aaKnown RBP17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 ZFYP08048 801 aaPredicted RBP17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 USH1GQ495M9 461 aa17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms