RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 BAP1Q92560 729 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 SALL4Q9UJQ4 1053 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 NCK2O43639 380 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 BUB1O43683 1085 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 USO1O60763 962 aaKnown RBP11.52□□□□□ -0.56
UFD1-206ENST00000466373 ALDH1B1P30837 517 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 HOXA13P31271 388 aaPredicted RBP11.52□□□□□ -0.56
UFD1-206ENST00000466373 USP14P54578 494 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 NAP1L1P55209 391 aaKnown RBP11.52□□□□□ -0.56
UFD1-206ENST00000466373 ICA1Q05084 483 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.56
UFD1-206ENST00000466373 SIAH1Q8IUQ4 282 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 MTMR8Q96EF0 704 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 LRRC27Q9C0I9 530 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 EHD2Q9NZN4 543 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 ADAM21Q9UKJ8 722 aa11.52□□□□□ -0.56
UFD1-206ENST00000466373 ANKRD31Q8N7Z5 1873 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 F5H6K3 240 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 MEIS2O14770 477 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 GCFC2P16383 781 aaKnown RBP11.52□□□□□ -0.57
UFD1-206ENST00000466373 MAGEA1P43355 309 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 POLR2FP61218 127 aaKnown RBP11.52□□□□□ -0.57
UFD1-206ENST00000466373 CDK17Q00537 523 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 CYP4A11Q02928 519 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 KLRC3Q07444 240 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 PSMD2Q13200 908 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 ZCWPW2Q504Y3 356 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
UFD1-206ENST00000466373 CYP2W1Q8TAV3 490 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 SCFD1Q8WVM8 642 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 BCAS3Q9H6U6 928 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
UFD1-206ENST00000466373 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 LMAN1P49257 510 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 CASP5P51878 434 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 ARHGAP4P98171 946 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 NFRKBQ6P4R8 1299 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 CCDC65Q8IXS2 484 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 ZDHHC15Q96MV8 337 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 LSM14BQ9BX40 385 aaKnown RBP11.51□□□□□ -0.57
UFD1-206ENST00000466373 SH2D4AQ9H788 454 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 EMILIN3Q9NT22 766 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 PI4KBQ9UBF8 816 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 TACC1O75410 805 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 CYP11B2P19099 503 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 HNRNPH3P31942 346 aaKnown RBP11.51□□□□□ -0.57
UFD1-206ENST00000466373 TUBB4BP68371 445 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 JAG1P78504 1218 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 ARSHQ5FYA8 562 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 ZNF662Q6ZS27 426 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 CATSPER3Q86XQ3 398 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 NLGN1Q8N2Q7 840 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
UFD1-206ENST00000466373 TDRD3Q9H7E2 651 aaKnown RBP11.51□□□□□ -0.57
UFD1-206ENST00000466373 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.51□□□□□ -0.57
UFD1-206ENST00000466373 LRRC37AA6NMS7 1700 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 KDM3AQ9Y4C1 1321 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 MYBL2P10244 700 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 GPS2Q13227 327 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 ADAM9Q13443 819 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 EZH2Q15910 746 aaKnown RBP11.51□□□□□ -0.57
UFD1-206ENST00000466373 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 PDXDC1Q6P996 788 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 TRIM58Q8NG06 486 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 TSGA10Q9BZW7 698 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 GBP3Q9H0R5 595 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 KCNMB3Q9NPA1 279 aa11.51□□□□□ -0.57
UFD1-206ENST00000466373 MYO3BQ8WXR4 1341 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 FAM86B1E9PN63 330 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 NOL4O94818 638 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 FAM86B2P0C5J1 330 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 CKAP4Q07065 602 aaKnown RBP11.5□□□□□ -0.57
UFD1-206ENST00000466373 WDR93Q6P2C0 686 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 CREG2Q8IUH2 290 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 HDAC7Q8WUI4 952 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 MASTLQ96GX5 879 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 ZFP91Q96JP5 570 aaPredicted RBP11.5□□□□□ -0.57
UFD1-206ENST00000466373 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 JRKLQ9Y4A0 524 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 PCDHA2Q9Y5H9 948 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 ECE2O60344 883 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 TLR2O60603 784 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 EIF3JO75822 258 aaKnown RBP11.5□□□□□ -0.57
UFD1-206ENST00000466373 NDUFB10O96000 172 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 GH2P01242 217 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 PDE6BP35913 854 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 EPS15P42566 896 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 HGSNATQ68CP4 663 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.5□□□□□ -0.57
UFD1-206ENST00000466373 EHD4Q9H223 541 aa11.5□□□□□ -0.57
UFD1-206ENST00000466373 ANO9A1A5B4 782 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 SPDYE3A6NKU9 549 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 USP11P51784 963 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 SLC7A5Q01650 507 aa11.49□□□□□ -0.57
UFD1-206ENST00000466373 RAPGEF1Q13905 1077 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms