RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FOXD4L6Q3SYB3 417 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-215ENST00000465457 FOXD4L3Q6VB84 417 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-215ENST00000465457 ZNF444Q8N0Y2 327 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-215ENST00000465457 CTCFLQ8NI51 663 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-215ENST00000465457 ZKSCAN3Q9BRR0 538 aa15.81■□□□□ 0.12
HDAC6-215ENST00000465457 SENP2Q9HC62 589 aa15.81■□□□□ 0.12
HDAC6-215ENST00000465457 FAM217BQ9NTX9 383 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-215ENST00000465457 NYAP2Q9P242 653 aa15.81■□□□□ 0.12
HDAC6-215ENST00000465457 CLIP2Q9UDT6 1046 aa15.81■□□□□ 0.12
HDAC6-215ENST00000465457 FBXO40Q9UH90 709 aa15.81■□□□□ 0.12
HDAC6-215ENST00000465457 CTDP1Q9Y5B0 961 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-215ENST00000465457 MYH15Q9Y2K3 1946 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 IGKV6D-41A0A0C4DH26 115 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 GOLGA6L4A6NEF3 574 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 PRDM1O75626 825 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 IQCF3P0C7M6 154 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 ACTN1P12814 892 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 SSTR3P32745 418 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-215ENST00000465457 DEFB103AP81534 67 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 PURAQ00577 322 aaKnown RBP15.8■□□□□ 0.12
HDAC6-215ENST00000465457 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
HDAC6-215ENST00000465457 MUM1L1Q5H9M0 696 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 PPP4R3BQ5MIZ7 849 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 SUGCTQ9HAC7 445 aa15.8■□□□□ 0.12
HDAC6-215ENST00000465457 PLIN4Q96Q06 1357 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 ZEB2O60315 1214 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 TSPY3P0CV98 308 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 TSPY8P0CW00 308 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 OAZ1P54368 228 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 GPNMBQ14956 572 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 SAFBQ15424 915 aaKnown RBP eCLIP15.79■□□□□ 0.12
HDAC6-215ENST00000465457 ZSCAN23Q3MJ62 389 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 CCDC183Q5T5S1 534 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 RAB11FIP4Q86YS3 637 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 PHOSPHO2Q8TCD6 241 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 LEO1Q8WVC0 666 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-215ENST00000465457 CEP95Q96GE4 821 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 CHAMP1Q96JM3 812 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 SLC26A6Q9BXS9 759 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 FTOQ9C0B1 505 aaKnown RBP eCLIP15.79■□□□□ 0.12
HDAC6-215ENST00000465457 KAT14Q9H8E8 782 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 NLRC5Q86WI3 1866 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 TECTAO75443 2155 aa15.79■□□□□ 0.12
HDAC6-215ENST00000465457 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-215ENST00000465457 ASB14A6NK59 587 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 MYL3P08590 195 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 RXRAP19793 462 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 GNAQP50148 359 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 WDR5P61964 334 aaKnown RBP15.78■□□□□ 0.12
HDAC6-215ENST00000465457 TFAP4Q01664 338 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 TROAPQ12815 778 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 LEXMQ3ZCV2 418 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-215ENST00000465457 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 MICAL3Q7RTP6 2002 aa15.78■□□□□ 0.12
HDAC6-215ENST00000465457 YEATS4O95619 227 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 ALAS1P13196 640 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 GNL2Q13823 731 aaKnown RBP15.77■□□□□ 0.12
HDAC6-215ENST00000465457 NBPF20Q3BBV1 942 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 PTCRAQ6ISU1 281 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-215ENST00000465457 NEDD1Q8NHV4 660 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 TRERF1Q96PN7 1200 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 CTAGE1Q96RT6 745 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 SEZ6LQ9BYH1 1024 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 CYP39A1Q9NYL5 469 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 RCOR1Q9UKL0 485 aa15.77■□□□□ 0.12
HDAC6-215ENST00000465457 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 H3BQ06 376 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-215ENST00000465457 PRPF3O43395 683 aaKnown RBP15.76■□□□□ 0.11
HDAC6-215ENST00000465457 DTNBO60941 627 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 GADD45BO75293 160 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-215ENST00000465457 SUPT20HL2P0C7V6 817 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 RFC2P35250 354 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 DUSP28Q4G0W2 176 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 IQSEC1Q6DN90 963 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 TMTC3Q6ZXV5 915 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 KCNG4Q8TDN1 519 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 PHKBQ93100 1093 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 LZTS2Q9BRK4 669 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 POLR3EQ9NVU0 708 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 RTEL1Q9NZ71 1219 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 TMEM63CQ9P1W3 806 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 Q9Y3F1 56 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 ZDBF2Q9HCK1 2354 aa15.76■□□□□ 0.11
HDAC6-215ENST00000465457 LINC01553A4QN01 128 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 KIF28PB7ZC32 967 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 BMP3P12645 472 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 U2AF2P26368 475 aaKnown RBP eCLIP15.75■□□□□ 0.11
HDAC6-215ENST00000465457 SLFN13Q68D06 897 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 HFE2Q6ZVN8 426 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 COPS5Q92905 334 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 VTA1Q9NP79 307 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 MTMR4Q9NYA4 1195 aa15.75■□□□□ 0.11
HDAC6-215ENST00000465457 TCHHQ07283 1943 aa15.74■□□□□ 0.11
HDAC6-215ENST00000465457 KMT2EQ8IZD2 1858 aa15.74■□□□□ 0.11
HDAC6-215ENST00000465457 GRXCR2A6NFK2 248 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms