RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 DEXIO95424 95 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 UBA1P22314 1058 aaKnown RBP14.91□□□□□ -0.02
COL28A1-206ENST00000465339 CLK2P49760 499 aaKnown RBP14.91□□□□□ -0.02
COL28A1-206ENST00000465339 PSMC6P62333 389 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 SH3RF1Q7Z6J0 888 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 FAM126BQ8IXS8 530 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 FAM177A1Q8N128 213 aaPredicted RBP14.91□□□□□ -0.02
COL28A1-206ENST00000465339 BICD2Q8TD16 824 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 SLC39A7Q92504 469 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 TRIM43Q96BQ3 446 aaPredicted RBP14.91□□□□□ -0.02
COL28A1-206ENST00000465339 SPATA33Q96N06 139 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 UBIAD1Q9Y5Z9 338 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 LTBP2Q14767 1821 aa14.91□□□□□ -0.02
COL28A1-206ENST00000465339 TRIOBPQ9H2D6 2365 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 CD4P01730 458 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 SUPT20HL2P0C7V6 817 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 HOXD8P13378 290 aaPredicted RBP14.9□□□□□ -0.02
COL28A1-206ENST00000465339 RAG1P15918 1043 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 MDM2Q00987 491 aaPredicted RBP14.9□□□□□ -0.02
COL28A1-206ENST00000465339 PTPN11Q06124 597 aaPredicted RBP14.9□□□□□ -0.02
COL28A1-206ENST00000465339 SCRN1Q12765 414 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 NBPF20Q3BBV1 942 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 NFRKBQ6P4R8 1299 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 METTL7BQ6UX53 244 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 REXO1Q8N1G1 1221 aaKnown RBP14.9□□□□□ -0.02
COL28A1-206ENST00000465339 ANO3Q9BYT9 981 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 UBE2OQ9C0C9 1292 aaKnown RBP14.9□□□□□ -0.02
COL28A1-206ENST00000465339 JADE2Q9NQC1 790 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 METRNQ9UJH8 293 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 DOCK5Q9H7D0 1870 aa14.9□□□□□ -0.02
COL28A1-206ENST00000465339 PPFIA3O75145 1194 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 TIMP1P01033 207 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 ITGB5P18084 799 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 SREBF1P36956 1147 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 SEMA3FQ13275 785 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 MTMR1Q13613 665 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 HSDL1Q3SXM5 330 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 BADQ92934 168 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 MXRA8Q9BRK3 442 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 KATNAL1Q9BW62 490 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 TMEM260Q9NX78 707 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 TBX21Q9UL17 535 aa14.89□□□□□ -0.03
COL28A1-206ENST00000465339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.88□□□□□ -0.03
COL28A1-206ENST00000465339 NOP56O00567 594 aaKnown RBP14.88□□□□□ -0.03
COL28A1-206ENST00000465339 C7P10643 843 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 NLRP5P59047 1200 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 JAKMIP3Q5VZ66 844 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 GALNT17Q6IS24 598 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 CYFIP1Q7L576 1253 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 KAT2BQ92831 832 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 C22orf23Q9BZE7 217 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 STK36Q9NRP7 1315 aa14.88□□□□□ -0.03
COL28A1-206ENST00000465339 B4GALT4O60513 344 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 CYP3A4P08684 503 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 XBP1P17861 261 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 ITGB8P26012 769 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 ZNF76P36508 570 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 RBM25P49756 843 aaKnown RBP14.87□□□□□ -0.03
COL28A1-206ENST00000465339 ARHGAP4P98171 946 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 ME3Q16798 604 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 CEP55Q53EZ4 464 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 FAM47CQ5HY64 1035 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 NIPA1Q7RTP0 329 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 SESTD1Q86VW0 696 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 TDHQ8IZJ6 230 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 IL27Q8NEV9 243 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 PGBD1Q96JS3 809 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 TRPV6Q9H1D0 765 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 BCAS3Q9H6U6 928 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 UPF2Q9HAU5 1272 aaKnown RBP14.87□□□□□ -0.03
COL28A1-206ENST00000465339 KCNH7Q9NS40 1196 aa14.87□□□□□ -0.03
COL28A1-206ENST00000465339 HAS3O00219 553 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 MEIS1O00470 390 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 SORBS3O60504 671 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 ATP9AO75110 1047 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 F2P00734 622 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 KCNA2P16389 499 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 PSEN2P49810 448 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 MFSD10Q14728 455 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 MFSD5Q6N075 450 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 C7orf31Q8N865 590 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 CRYGNQ8WXF5 182 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 WASF1Q92558 559 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 GTF3C6Q969F1 213 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 GPR20Q99678 358 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 C16orf70Q9BSU1 422 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 PCDHA4Q9UN74 947 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
COL28A1-206ENST00000465339 H3BRB1 525 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 ADAMTS3O15072 1205 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 CTDNEP1O95476 244 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 ZNF286BP0CG31 522 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 CHMP4BP1P59074 171 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 FPGSQ05932 587 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 KIAA0753Q2KHM9 967 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 TMEM199Q8N511 208 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 NECAB1Q8N987 351 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 DAGLBQ8NCG7 672 aa14.85□□□□□ -0.03
COL28A1-206ENST00000465339 CYP2W1Q8TAV3 490 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms