RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ATP9AO75110 1047 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 ARP10275 920 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 HOXD8P13378 290 aaPredicted RBP19.23■□□□□ 0.67
USP39-211ENST00000465282 BEX3Q00994 111 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 BECN1Q14457 450 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 DGKDQ16760 1214 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 PRR16Q569H4 304 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 CYFIP1Q7L576 1253 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 NOSTRINQ8IVI9 506 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 AFG1LQ8WV93 481 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 GLT1D1Q96MS3 346 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 SPATA33Q96N06 139 aa19.23■□□□□ 0.67
USP39-211ENST00000465282 IPO5O00410 1097 aaKnown RBP19.22■□□□□ 0.67
USP39-211ENST00000465282 NOP56O00567 594 aaKnown RBP19.22■□□□□ 0.67
USP39-211ENST00000465282 MMP3P08254 477 aa19.22■□□□□ 0.67
USP39-211ENST00000465282 TRAPPC10P48553 1259 aa19.22■□□□□ 0.67
USP39-211ENST00000465282 ORC2Q13416 577 aaPredicted RBP19.22■□□□□ 0.67
USP39-211ENST00000465282 LETM2Q2VYF4 491 aa19.22■□□□□ 0.67
USP39-211ENST00000465282 DIS3LQ8TF46 1054 aaKnown RBP19.22■□□□□ 0.67
USP39-211ENST00000465282 LENG9Q96B70 501 aa19.22■□□□□ 0.67
USP39-211ENST00000465282 ZNF577Q9BSK1 485 aa19.22■□□□□ 0.67
USP39-211ENST00000465282 HTATIP2Q9BUP3 242 aa19.22■□□□□ 0.67
USP39-211ENST00000465282 SENP6Q9GZR1 1112 aaPredicted RBP19.22■□□□□ 0.67
USP39-211ENST00000465282 A0A1W2PQ45 241 aaPredicted RBP19.21■□□□□ 0.67
USP39-211ENST00000465282 A0A1W2PQY0 241 aa19.21■□□□□ 0.67
USP39-211ENST00000465282 HSDL1Q3SXM5 330 aa19.21■□□□□ 0.67
USP39-211ENST00000465282 EARS2Q5JPH6 523 aaKnown RBP19.21■□□□□ 0.67
USP39-211ENST00000465282 C1orf53Q5VUE5 145 aa19.21■□□□□ 0.67
USP39-211ENST00000465282 FAM20AQ96MK3 541 aa19.21■□□□□ 0.67
USP39-211ENST00000465282 RIT2Q99578 217 aa19.21■□□□□ 0.67
USP39-211ENST00000465282 MTG1Q9BT17 334 aaPredicted RBP19.21■□□□□ 0.67
USP39-211ENST00000465282 JPH1Q9HDC5 661 aaPredicted RBP19.21■□□□□ 0.67
USP39-211ENST00000465282 DDX25Q9UHL0 483 aaKnown RBP19.21■□□□□ 0.67
USP39-211ENST00000465282 SCN10AQ9Y5Y9 1956 aa19.21■□□□□ 0.67
USP39-211ENST00000465282 TBX3O15119 743 aa19.2■□□□□ 0.66
USP39-211ENST00000465282 CCNT1O60563 726 aaKnown RBP19.2■□□□□ 0.66
USP39-211ENST00000465282 TDP2O95551 362 aa19.2■□□□□ 0.66
USP39-211ENST00000465282 PTGS1P23219 599 aa19.2■□□□□ 0.66
USP39-211ENST00000465282 IRX5P78411 483 aaPredicted RBP19.2■□□□□ 0.66
USP39-211ENST00000465282 PURAQ00577 322 aaKnown RBP19.2■□□□□ 0.66
USP39-211ENST00000465282 STARD7Q9NQZ5 370 aa19.2■□□□□ 0.66
USP39-211ENST00000465282 SLC9A2Q9UBY0 812 aa19.2■□□□□ 0.66
USP39-211ENST00000465282 TCEAL9Q9UHQ7 104 aa19.2■□□□□ 0.66
USP39-211ENST00000465282 NOL7Q9UMY1 257 aaKnown RBP19.2■□□□□ 0.66
USP39-211ENST00000465282 MSH4O15457 936 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 MYL3P08590 195 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 ITGB3BPQ13352 177 aaPredicted RBP19.19■□□□□ 0.66
USP39-211ENST00000465282 MCTP1Q6DN14 999 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 CXCL17Q6UXB2 119 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 SEPT1Q8WYJ6 367 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 SLC5A5Q92911 643 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 GPR20Q99678 358 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 KATNAL1Q9BW62 490 aa19.19■□□□□ 0.66
USP39-211ENST00000465282 WDR81Q562E7 1941 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 FAM205CA6NFA0 338 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 DHX15O43143 795 aaKnown RBP19.18■□□□□ 0.66
USP39-211ENST00000465282 BAG4O95429 457 aaKnown RBP19.18■□□□□ 0.66
USP39-211ENST00000465282 SYT1P21579 422 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 KRT76Q01546 638 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 SNX17Q15036 470 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 ZNF746Q6NUN9 644 aaPredicted RBP19.18■□□□□ 0.66
USP39-211ENST00000465282 SLC39A5Q6ZMH5 540 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 FERMT2Q96AC1 680 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 VTI1AQ96AJ9 217 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 BCAS3Q9H6U6 928 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 PKD2L1Q9P0L9 805 aa19.18■□□□□ 0.66
USP39-211ENST00000465282 MYH9P35579 1960 aaKnown RBP19.17■□□□□ 0.66
USP39-211ENST00000465282 A0A0U1RQG5 324 aaPredicted RBP19.17■□□□□ 0.66
USP39-211ENST00000465282 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 F2P00734 622 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 RILPL1Q5EBL4 403 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 BRAPQ7Z569 592 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 SMAP1Q8IYB5 467 aaPredicted RBP19.17■□□□□ 0.66
USP39-211ENST00000465282 SLFN12Q8IYM2 578 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 ETNPPLQ8TBG4 499 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 KCNMB3Q9NPA1 279 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 MROH7Q68CQ1 1323 aa19.17■□□□□ 0.66
USP39-211ENST00000465282 TNRC18O15417 2968 aaPredicted RBP19.16■□□□□ 0.66
USP39-211ENST00000465282 SLC37A4O43826 429 aa19.16■□□□□ 0.66
USP39-211ENST00000465282 GAS7O60861 476 aa19.16■□□□□ 0.66
USP39-211ENST00000465282 ATG7O95352 703 aa19.16■□□□□ 0.66
USP39-211ENST00000465282 LRCH2Q5VUJ6 765 aa19.16■□□□□ 0.66
USP39-211ENST00000465282 SLC43A3Q8NBI5 491 aa19.16■□□□□ 0.66
USP39-211ENST00000465282 TEKT3Q9BXF9 490 aa19.16■□□□□ 0.66
USP39-211ENST00000465282 FOXD4L1Q9NU39 408 aa19.16■□□□□ 0.66
USP39-211ENST00000465282 ZNF215Q9UL58 517 aaPredicted RBP19.16■□□□□ 0.66
USP39-211ENST00000465282 ALPK3Q96L96 1907 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 KAT6AQ92794 2004 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 GSTTP1A0A1W2PQM5 241 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 VPS37CA5D8V6 355 aaPredicted RBP19.15■□□□□ 0.66
USP39-211ENST00000465282 ARVCFO00192 962 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 STX6O43752 255 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 MARCH6O60337 910 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 SORBS3O60504 671 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 NEMFO60524 1076 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 PSMD10O75832 226 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 SFNP31947 248 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 TCF7P36402 384 aaPredicted RBP19.15■□□□□ 0.66
USP39-211ENST00000465282 CDK7P50613 346 aa19.15■□□□□ 0.66
USP39-211ENST00000465282 ACTR2P61160 394 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms