RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 OPLAHO14841 1288 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 MYZAPP0CAP1 466 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 CTNNA1P35221 906 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 HSPA9P38646 679 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 UBE4AQ14139 1066 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 FAM228AQ86W67 206 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 GUF1Q8N442 669 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 DAGLBQ8NCG7 672 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 WHAMMQ8TF30 809 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 UBLCP1Q8WVY7 318 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ACSBG1Q96GR2 724 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ZMYND12Q9H0C1 365 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 TAF1DQ9H5J8 278 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 BTG4Q9NY30 223 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 TAF1P21675 1872 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 BCL9O00512 1426 aa13.83□□□□□ -0.19
CLCNKA-204ENST00000464764 SHANK3Q9BYB0 1731 aa13.83□□□□□ -0.19
CLCNKA-204ENST00000464764 GMNCA6NCL1 334 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 SERPING1P05155 500 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 SMTNP53814 917 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 DDR1Q08345 913 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 EMC10Q5UCC4 262 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 CCDC121Q6ZUS5 278 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 FAM212AQ96EL1 285 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 CDK5RAP3Q96JB5 506 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 MAGEF1Q9HAY2 307 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 ARPP21Q9UBL0 812 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 NOVA2Q9UNW9 492 aaKnown RBP13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 ATP6V0A2Q9Y487 856 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 PALM3A6NDB9 673 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 GOLGA6L10A6NI86 522 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 RBAK-RBAKDNI3L0D1 243 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 EDIL3O43854 480 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 CCDC172P0C7W6 258 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 KLHL30Q0D2K2 578 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 C12orf60Q5U649 245 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 YTHDF3Q7Z739 585 aaKnown RBP13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 SH3RF3Q8TEJ3 882 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 PIGSQ96S52 555 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 FBXL5Q9UKA1 691 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 LEMD3Q9Y2U8 911 aa13.83□□□□□ -0.2
CLCNKA-204ENST00000464764 NPHP3-ACAD11A0A0J9YXS1 232 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 GOLGA6L7A0A1B0GV03 622 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 DAPK3O43293 454 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 E2F5Q15329 346 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 GRIK5Q16478 980 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SLC18A3Q16572 532 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 FBXO33Q7Z6M2 555 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 ANKS1AQ92625 1134 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 CELF4Q9BZC1 486 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 AMACRQ9UHK6 382 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SLC12A6Q9UHW9 1150 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 TSKSQ9UJT2 592 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 PCDHGC5Q9Y5F6 944 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 ATXN2Q99700 1313 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 CHUKO15111 745 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SART1O43290 800 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 BYSLQ13895 437 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 RPS6KA1Q15418 735 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 CALCRLQ16602 461 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SPATS2Q86XZ4 545 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 KIRREL3Q8IZU9 778 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 COA7Q96BR5 231 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 PAGR1Q9BTK6 254 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 TRIM31Q9BZY9 425 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 ISCUQ9H1K1 167 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 PLCB1Q9NQ66 1216 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 CCDC87Q9NVE4 849 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 CEP72Q9P209 647 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SCP2P22307 547 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 MAGOHP61326 146 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SBK1Q52WX2 424 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 KRT25Q7Z3Z0 450 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SNX29Q8TEQ0 813 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 RAPGEF5Q92565 580 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 MAGOHBQ96A72 148 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 IQCDQ96DY2 449 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 SEC16BQ96JE7 1060 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 TMEM59LQ9UK28 342 aa13.82□□□□□ -0.2
CLCNKA-204ENST00000464764 MYBP10242 640 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 RDXP35241 583 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 KCNQ4P56696 695 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 TNNC1P63316 161 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 PTK2Q05397 1052 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 LRRC63Q05C16 580 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 TGFBRAP1Q8WUH2 860 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 TAF4BQ92750 862 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 DPH5Q9H2P9 285 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 SUFUQ9UMX1 484 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
CLCNKA-204ENST00000464764 GNAQP50148 359 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms