RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 PRR31Q5SQ13 230 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 EP400NLQ6ZTU2 488 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 KBTBD2Q8IY47 623 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 JAM3Q9BX67 310 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 ZNF408Q9H9D4 720 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 SLC6A20Q9NP91 592 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 GPR27Q9NS67 375 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 FBXL7Q9UJT9 491 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 TCAF1Q9Y4C2 921 aa4.97□□□□□ -1.61
GARNL3-213ENST00000464616 SLC27A2O14975 620 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 FSHBP01225 129 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 LRG1P02750 347 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 ZNF20P17024 532 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 MLLT6P55198 1093 aaPredicted RBP4.96□□□□□ -1.62
GARNL3-213ENST00000464616 GRIN1Q05586 938 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 CYP4F3Q08477 520 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 CYP4F22Q6NT55 531 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 USP51Q70EK9 711 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 DPH6Q7L8W6 267 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 IFNL2Q8IZJ0 200 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 KLHL36Q8N4N3 616 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 PIP4K2CQ8TBX8 421 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 SH3RF3Q8TEJ3 882 aaPredicted RBP4.96□□□□□ -1.62
GARNL3-213ENST00000464616 KCNJ15Q99712 375 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 PHF20Q9BVI0 1012 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 ASH2LQ9UBL3 628 aa4.96□□□□□ -1.62
GARNL3-213ENST00000464616 PPP1R1BQ9UD71 204 aaPredicted RBP4.96□□□□□ -1.62
GARNL3-213ENST00000464616 B4GALT3O60512 393 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 APPP05067 770 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 TCF3P15923 654 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 NFATC3Q12968 1075 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 TESK1Q15569 626 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 KIZQ2M2Z5 673 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 SLC10A6Q3KNW5 377 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 HS1BP3Q53T59 392 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 MRM1Q6IN84 353 aaKnown RBP4.95□□□□□ -1.62
GARNL3-213ENST00000464616 RSPO2Q6UXX9 243 aaPredicted RBP4.95□□□□□ -1.62
GARNL3-213ENST00000464616 MICAL1Q8TDZ2 1067 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 YTHDC1Q96MU7 727 aaKnown RBP4.95□□□□□ -1.62
GARNL3-213ENST00000464616 IPO9Q96P70 1041 aaKnown RBP4.95□□□□□ -1.62
GARNL3-213ENST00000464616 AARSD1Q9BTE6 412 aaKnown RBP4.95□□□□□ -1.62
GARNL3-213ENST00000464616 DLL4Q9NR61 685 aa4.95□□□□□ -1.62
GARNL3-213ENST00000464616 A0A1W2PQU0 124 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 ARNTLO00327 626 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 U2SURPO15042 1029 aaKnown RBP4.94□□□□□ -1.62
GARNL3-213ENST00000464616 GRK2P25098 689 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 GRK3P35626 688 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 GRIA2P42262 883 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 GDF5P43026 501 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 SMAD2Q15796 467 aaKnown RBP4.94□□□□□ -1.62
GARNL3-213ENST00000464616 SLC35F1Q5T1Q4 408 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 SLFN13Q68D06 897 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 ZNF585AQ6P3V2 769 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 ANKS3Q6ZW76 656 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 RALYLQ86SE5 291 aaKnown RBP4.94□□□□□ -1.62
GARNL3-213ENST00000464616 DCAF4Q8WV16 495 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 HNRNPLLQ8WVV9 542 aaKnown RBP4.94□□□□□ -1.62
GARNL3-213ENST00000464616 ALG1Q9BT22 464 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 C1QTNF3Q9BXJ4 246 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 TRIM55Q9BYV6 548 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 PPP4R1LQ9P1A2 415 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 ARHGAP20Q9P2F6 1191 aa4.94□□□□□ -1.62
GARNL3-213ENST00000464616 C1QTNF3-AMACRE9PGA6 284 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 MATN3O15232 486 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 PRODHO43272 600 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 ENO2P09104 434 aaPredicted RBP4.93□□□□□ -1.62
GARNL3-213ENST00000464616 TNFRSF1AP19438 455 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 GLRBP48167 497 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 IFRD2Q12894 506 aaPredicted RBP4.93□□□□□ -1.62
GARNL3-213ENST00000464616 TUSC3Q13454 348 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 DENND5AQ6IQ26 1287 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 NSMFQ6X4W1 530 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 OTOP3Q7RTS5 596 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 PALM2Q8IXS6 379 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 IFNL3Q8IZI9 196 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 IGDCC4Q8TDY8 1250 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 ZCCHC14Q8WYQ9 949 aaKnown RBP4.93□□□□□ -1.62
GARNL3-213ENST00000464616 SGSM3Q96HU1 749 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 KLC2Q9H0B6 622 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 NPFFR2Q9Y5X5 522 aa4.93□□□□□ -1.62
GARNL3-213ENST00000464616 FAM47E-STBD1D6RA91 191 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 DLX3O60479 287 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 CKMP06732 381 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 COL6A2P12110 1019 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 C6P13671 934 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 DDR2Q16832 855 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 PAN2Q504Q3 1202 aaKnown RBP4.92□□□□□ -1.62
GARNL3-213ENST00000464616 PHF19Q5T6S3 580 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 LRRC47Q8N1G4 583 aaKnown RBP4.92□□□□□ -1.62
GARNL3-213ENST00000464616 GIMAP8Q8ND71 665 aaPredicted RBP4.92□□□□□ -1.62
GARNL3-213ENST00000464616 TTLL11Q8NHH1 800 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 C1orf159Q96HA4 380 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 ZFYVE21Q9BQ24 234 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 SEMA4AQ9H3S1 761 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 RBPJLQ9UBG7 517 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 ZFP69BQ9UJL9 534 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 DSEQ9UL01 958 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 TSC22D4Q9Y3Q8 395 aa4.92□□□□□ -1.62
GARNL3-213ENST00000464616 TRAV20A0A0B4J274 112 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 AKAP8O43823 692 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms