RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 IDI2Q9BXS1 227 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 FUT8Q9BYC5 575 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 NHEJ1Q9H9Q4 299 aaPredicted RBP9.44□□□□□ -0.9
ACTB-208ENST00000464611 DBNDD1Q9H9R9 158 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 JMJD4Q9H9V9 463 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 VAT1LQ9HCJ6 419 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 MED4Q9NPJ6 270 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 BLOC1S4Q9NUP1 217 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 CALCOCO1Q9P1Z2 691 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 PI4KBQ9UBF8 816 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 DDX25Q9UHL0 483 aaKnown RBP9.44□□□□□ -0.9
ACTB-208ENST00000464611 ZNRF3Q9ULT6 936 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 MAPK8IP1Q9UQF2 711 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 BAZ2BQ9UIF8 2168 aaKnown RBP9.44□□□□□ -0.9
ACTB-208ENST00000464611 ATP8B3O60423 1300 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 A6NNZ2 444 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 PP2D1A8MPX8 630 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 B4DLN1 442 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 FANCGO15287 622 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 PJA2O43164 708 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 TCP1P17987 556 aaKnown RBP9.43□□□□□ -0.9
ACTB-208ENST00000464611 PLA2G4AP47712 749 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 GRIK5Q16478 980 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 EDRF1Q3B7T1 1238 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 TUBB8Q3ZCM7 444 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 GLE1Q53GS7 698 aaKnown RBP9.43□□□□□ -0.9
ACTB-208ENST00000464611 HSP90B2PQ58FF3 399 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 MIIPQ5JXC2 388 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 STRIP1Q5VSL9 837 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 WDR59Q6PJI9 974 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 ZNF572Q7Z3I7 529 aaPredicted RBP9.43□□□□□ -0.9
ACTB-208ENST00000464611 GOLGA6L1Q8N7Z2 621 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 ACRBPQ8NEB7 543 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 NEK11Q8NG66 645 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 EXOC4Q96A65 974 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 PNMA5Q96PV4 448 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 CHP1Q99653 195 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 GUCA1BQ9UMX6 200 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 L1RE1Q9UN81 338 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 JAG2Q9Y219 1238 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 BZW2Q9Y6E2 419 aaKnown RBP9.43□□□□□ -0.9
ACTB-208ENST00000464611 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
ACTB-208ENST00000464611 COL2A1P02458 1487 aaPredicted RBP9.42□□□□□ -0.9
ACTB-208ENST00000464611 TRIM49BA6NDI0 452 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 MYMKA6NI61 221 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 FZD9O00144 591 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 ENTPD3O75355 529 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 AKR1B1P15121 316 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 PMS1P54277 932 aaKnown RBP9.42□□□□□ -0.9
ACTB-208ENST00000464611 USP14P54578 494 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 TNIP1Q15025 636 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 Q4G0T1 1027 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 FAM26FQ5R3K3 315 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 BEND6Q5SZJ8 279 aaPredicted RBP9.42□□□□□ -0.9
ACTB-208ENST00000464611 CIAPIN1Q6FI81 312 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 TMEM179Q6ZVK1 233 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 GMCL1P1Q8NEA9 526 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 DDX12PQ92771 950 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 SECISBP2LQ93073 1101 aaKnown RBP9.42□□□□□ -0.9
ACTB-208ENST00000464611 UBA5Q9GZZ9 404 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 SEMA6BQ9H3T3 888 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 DEF6Q9H4E7 631 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 ANKZF1Q9H8Y5 726 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 METTL14Q9HCE5 456 aaKnown RBP9.42□□□□□ -0.9
ACTB-208ENST00000464611 CEP72Q9P209 647 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 SIK3Q9Y2K2 1263 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 COL4A3BPQ9Y5P4 624 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 MYH8P13535 1937 aa9.42□□□□□ -0.9
ACTB-208ENST00000464611 YDJCA8MPS7 323 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 RBAK-RBAKDNI3L0D1 243 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 RNF225M0QZC1 329 aaPredicted RBP9.41□□□□□ -0.9
ACTB-208ENST00000464611 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
ACTB-208ENST00000464611 ADAMTS3O15072 1205 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 CETN3O15182 167 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 AKR1B10O60218 316 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 SERPING1P05155 500 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 RPS12P25398 132 aaKnown RBP9.41□□□□□ -0.9
ACTB-208ENST00000464611 RPL13P26373 211 aaKnown RBP9.41□□□□□ -0.9
ACTB-208ENST00000464611 CYP2C19P33261 490 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 SHMT1P34896 483 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 PAFAH1B1P43034 410 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 MMP14P50281 582 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 PRELPP51888 382 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 MCM6Q14566 821 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 IFI16Q16666 785 aaKnown RBP9.41□□□□□ -0.9
ACTB-208ENST00000464611 PTPN21Q16825 1174 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 SLC9C1Q4G0N8 1177 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 CACNA2D4Q7Z3S7 1137 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 ZC3H3Q8IXZ2 948 aaKnown RBP9.41□□□□□ -0.9
ACTB-208ENST00000464611 MMGT1Q8N4V1 131 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 KIAA0895Q8NCT3 520 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 LRRN4CLQ8ND94 238 aa9.41□□□□□ -0.9
ACTB-208ENST00000464611 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.41□□□□□ -0.9
ACTB-208ENST00000464611 COA7Q96BR5 231 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms