RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CYP4F22Q6NT55 531 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 OTUD6AQ7L8S5 288 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 RIC8AQ9NPQ8 531 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 LEMD3Q9Y2U8 911 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 DAAM1Q9Y4D1 1078 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 CDHR2Q9BYE9 1310 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 LACTBP83111 547 aaPredicted RBP9.9□□□□□ -0.82
HPS4-208ENST00000464362 DPYDQ12882 1025 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 DLGAP5Q15398 846 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 JDP2Q8WYK2 163 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 THOC1Q96FV9 657 aaKnown RBP9.9□□□□□ -0.82
HPS4-208ENST00000464362 CSRNP1Q96S65 589 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 MLXIPLQ9NP71 852 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 SWAP70Q9UH65 585 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 EIF3CLB5ME19 914 aaKnown RBP9.9□□□□□ -0.82
HPS4-208ENST00000464362 PPP2R5DQ14738 602 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 GPATCH4Q5T3I0 446 aaKnown RBP9.9□□□□□ -0.82
HPS4-208ENST00000464362 TTBK2Q6IQ55 1244 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 MIGA2Q7L4E1 593 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 NSUN4Q96CB9 384 aaKnown RBP9.9□□□□□ -0.82
HPS4-208ENST00000464362 OSBPL9Q96SU4 736 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 EIF3CQ99613 913 aaKnown RBP9.9□□□□□ -0.82
HPS4-208ENST00000464362 PHF20Q9BVI0 1012 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 TRIM9Q9C026 710 aa9.9□□□□□ -0.82
HPS4-208ENST00000464362 WTIPA6NIX2 430 aaPredicted RBP9.9□□□□□ -0.83
HPS4-208ENST00000464362 PPFIA4O75335 1185 aa9.9□□□□□ -0.83
HPS4-208ENST00000464362 GAS8O95995 478 aa9.9□□□□□ -0.83
HPS4-208ENST00000464362 FGGP02679 453 aa9.9□□□□□ -0.83
HPS4-208ENST00000464362 PLEKP08567 350 aaPredicted RBP9.9□□□□□ -0.83
HPS4-208ENST00000464362 USP14P54578 494 aa9.9□□□□□ -0.83
HPS4-208ENST00000464362 ZNF746Q6NUN9 644 aaPredicted RBP9.9□□□□□ -0.83
HPS4-208ENST00000464362 SFR1Q86XK3 245 aa9.9□□□□□ -0.83
HPS4-208ENST00000464362 ARHGEF2Q92974 986 aaKnown RBP9.9□□□□□ -0.83
HPS4-208ENST00000464362 IQCDQ96DY2 449 aa9.9□□□□□ -0.83
HPS4-208ENST00000464362 PNKPQ96T60 521 aa9.9□□□□□ -0.83
HPS4-208ENST00000464362 METTL14Q9HCE5 456 aaKnown RBP9.9□□□□□ -0.83
HPS4-208ENST00000464362 MAP2K2P36507 400 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 KCNH2Q12809 1159 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 EARS2Q5JPH6 523 aaKnown RBP9.89□□□□□ -0.83
HPS4-208ENST00000464362 UNC13DQ70J99 1090 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 SLFN12Q8IYM2 578 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 SPATA4Q8NEY3 305 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 IFT74Q96LB3 600 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 MAGEF1Q9HAY2 307 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 INTS9Q9NV88 658 aaKnown RBP9.89□□□□□ -0.83
HPS4-208ENST00000464362 SNX24Q9Y343 169 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 NPHP3-ACAD11A0A0J9YXS1 232 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 SERPING1P05155 500 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 POLR2MP0CAP2 368 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 CDC37Q16543 378 aaPredicted RBP9.89□□□□□ -0.83
HPS4-208ENST00000464362 BSPRYQ5W0U4 402 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 ANO3Q9BYT9 981 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 LIMA1Q9UHB6 759 aaKnown RBP9.89□□□□□ -0.83
HPS4-208ENST00000464362 POC1B-GALNT4F8VUJ3 575 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 H0YIN7 160 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 THAP12O43422 761 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 TMOD1P28289 359 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 CYP2C19P33261 490 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 PCK1P35558 622 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 HHATQ5VTY9 493 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 TAOK1Q7L7X3 1001 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 CTAGE3PQ8IX95 158 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 PXDNQ92626 1479 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 L2HGDHQ9H9P8 463 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 UBE2TQ9NPD8 197 aaPredicted RBP9.89□□□□□ -0.83
HPS4-208ENST00000464362 KIAA1210Q9ULL0 1709 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 PLAAQ9Y263 795 aa9.89□□□□□ -0.83
HPS4-208ENST00000464362 PXDNLA1KZ92 1463 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 A6NNZ2 444 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 MYL7Q01449 175 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 TRPC3Q13507 836 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 TUBB8Q3ZCM7 444 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 C6orf163Q5TEZ5 329 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 ADSSL1Q8N142 457 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 MICAL1Q8TDZ2 1067 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 RSRC1Q96IZ7 334 aaKnown RBP9.88□□□□□ -0.83
HPS4-208ENST00000464362 JPH2Q9BR39 696 aaPredicted RBP9.88□□□□□ -0.83
HPS4-208ENST00000464362 CD209Q9NNX6 404 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 BARHL2Q9NY43 387 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 FAM169AQ9Y6X4 670 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 A0A0U1RQJ8 604 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 ALDH3A1P30838 453 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 LRRC63Q05C16 580 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 TROAPQ12815 778 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 STRN3Q13033 797 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 COASYQ13057 564 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 FAM133BQ5BKY9 247 aaKnown RBP9.88□□□□□ -0.83
HPS4-208ENST00000464362 COG1Q8WTW3 980 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 POMGNT1Q8WZA1 660 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 ZNF653Q96CK0 615 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 TRIM37O94972 964 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 KRT14P02533 472 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 AKR1B1P15121 316 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 ERVK-24P63145 666 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 LIN9Q5TKA1 542 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 RASGRP2Q7LDG7 609 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 NLRX1Q86UT6 975 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 HOOK2Q96ED9 719 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 ZNF577Q9BSK1 485 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms