RNA–Protein interactions for RNA: ENST00000464029.5

SYPL1-204, Transcript of synaptophysin like 1, humanhuman

TSL 2

Gene SYPL1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-204ENST00000464029 COL3A1P02461 1466 aaPredicted RBP7.43□□□□□ -1.22
SYPL1-204ENST00000464029 TULP4Q9NRJ4 1543 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 U2AF1L5P0DN76 240 aaPredicted RBP7.43□□□□□ -1.22
SYPL1-204ENST00000464029 VAV1P15498 845 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 MAPKAPK2P49137 400 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 U2AF1Q01081 240 aaKnown RBP eCLIP7.43□□□□□ -1.22
SYPL1-204ENST00000464029 PLP2Q04941 152 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 PLEKHN1Q494U1 663 aaPredicted RBP7.43□□□□□ -1.22
SYPL1-204ENST00000464029 CLEC17AQ6ZS10 378 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 NLRC3Q7RTR2 1065 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 ANP32BQ92688 251 aaKnown RBP7.43□□□□□ -1.22
SYPL1-204ENST00000464029 C8orf37Q96NL8 207 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 SMC4Q9NTJ3 1288 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 GFOD1Q9NXC2 390 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 PRR13Q9NZ81 148 aa7.43□□□□□ -1.22
SYPL1-204ENST00000464029 XRN1Q8IZH2 1706 aaKnown RBP7.43□□□□□ -1.22
SYPL1-204ENST00000464029 NHSL1Q5SYE7 1610 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 MEIS1O00470 390 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 TMPOP42166 694 aaKnown RBP7.42□□□□□ -1.22
SYPL1-204ENST00000464029 KCNC1P48547 511 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 NUCB1Q02818 461 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 NR1I3Q14994 352 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 ZXDCQ2QGD7 858 aaPredicted RBP7.42□□□□□ -1.22
SYPL1-204ENST00000464029 TMEM192Q8IY95 271 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 EAF1Q96JC9 268 aaPredicted RBP7.42□□□□□ -1.22
SYPL1-204ENST00000464029 JMJD8Q96S16 334 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 PLEKHF1Q96S99 279 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 ZBTB40Q9NUA8 1239 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 IMPACTQ9P2X3 320 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 PCDHB12Q9Y5F1 795 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 PTCH1Q13635 1447 aa7.42□□□□□ -1.22
SYPL1-204ENST00000464029 PRICKLE3O43900 615 aaPredicted RBP7.41□□□□□ -1.22
SYPL1-204ENST00000464029 DIAPH1O60610 1272 aaKnown RBP7.41□□□□□ -1.22
SYPL1-204ENST00000464029 PFKLP17858 780 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 EIF4A3P38919 411 aaKnown RBP7.41□□□□□ -1.22
SYPL1-204ENST00000464029 CRKP46108 304 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 SLURP1P55000 103 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 GNAI1P63096 354 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 MRPL58Q14197 206 aaKnown RBP7.41□□□□□ -1.22
SYPL1-204ENST00000464029 HS1BP3Q53T59 392 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 ZFYVE27Q5T4F4 411 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 ZC3H14Q6PJT7 736 aaKnown RBP7.41□□□□□ -1.22
SYPL1-204ENST00000464029 NLGN1Q8N2Q7 840 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYPL1-204ENST00000464029 BDH2Q9BUT1 245 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 COPRSQ9NQ92 184 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 METP08581 1390 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 CDK12Q9NYV4 1490 aaPredicted RBP7.41□□□□□ -1.22
SYPL1-204ENST00000464029 NALCNQ8IZF0 1738 aa7.41□□□□□ -1.22
SYPL1-204ENST00000464029 EPB41L2O43491 1005 aaKnown RBP7.4□□□□□ -1.22
SYPL1-204ENST00000464029 TRIM27P14373 513 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 LIMS1P48059 325 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 TERF1P54274 439 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 ZNF200P98182 395 aaPredicted RBP7.4□□□□□ -1.22
SYPL1-204ENST00000464029 MVKQ03426 396 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 RTP5Q14D33 572 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 RTP2Q5QGT7 225 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 CASC1Q6TDU7 716 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 ITPRIPQ8IWB1 547 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 UBE2Q2Q8WVN8 375 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 SLC6A18Q96N87 628 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 API5Q9BZZ5 524 aaKnown RBP7.4□□□□□ -1.22
SYPL1-204ENST00000464029 MKRN2Q9H000 416 aaKnown RBP7.4□□□□□ -1.22
SYPL1-204ENST00000464029 SLC12A5Q9H2X9 1139 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 IFT57Q9NWB7 429 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 AATKQ6ZMQ8 1374 aa7.4□□□□□ -1.22
SYPL1-204ENST00000464029 KIF20BQ96Q89 1820 aa7.4□□□□□ -1.23
SYPL1-204ENST00000464029 DCCP43146 1447 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 CPSF1Q10570 1443 aaKnown RBP7.39□□□□□ -1.23
SYPL1-204ENST00000464029 ADGRL3Q9HAR2 1447 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 A0A1W2PP64 1363 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 TNFRSF10CO14798 259 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 NME1P15531 152 aaKnown RBP7.39□□□□□ -1.23
SYPL1-204ENST00000464029 FBLN1P23142 703 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 DDIT3P35638 169 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 NUCB2P80303 420 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 CLCQ05315 142 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 AUHQ13825 339 aaKnown RBP7.39□□□□□ -1.23
SYPL1-204ENST00000464029 VWA3BQ502W6 1294 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 CRTC3Q6UUV7 619 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 CHD1LQ86WJ1 897 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 REXO1Q8N1G1 1221 aaKnown RBP7.39□□□□□ -1.23
SYPL1-204ENST00000464029 TRIM44Q96DX7 344 aaPredicted RBP7.39□□□□□ -1.23
SYPL1-204ENST00000464029 TMPRSS5Q9H3S3 457 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 FBXL21Q9UKT6 434 aa7.39□□□□□ -1.23
SYPL1-204ENST00000464029 CNOT11Q9UKZ1 510 aaKnown RBP7.39□□□□□ -1.23
SYPL1-204ENST00000464029 SOS1Q07889 1333 aaPredicted RBP7.38□□□□□ -1.23
SYPL1-204ENST00000464029 MEIS3P2A8K0S8 358 aa7.38□□□□□ -1.23
SYPL1-204ENST00000464029 SRGAP3O43295 1099 aa7.38□□□□□ -1.23
SYPL1-204ENST00000464029 RRP9O43818 475 aaKnown RBP7.38□□□□□ -1.23
SYPL1-204ENST00000464029 GSNP06396 782 aa7.38□□□□□ -1.23
SYPL1-204ENST00000464029 HSP90AB1P08238 724 aaKnown RBP7.38□□□□□ -1.23
SYPL1-204ENST00000464029 MSL3P1P0C860 447 aa7.38□□□□□ -1.23
SYPL1-204ENST00000464029 MCM2P49736 904 aa7.38□□□□□ -1.23
SYPL1-204ENST00000464029 RBM6P78332 1123 aaKnown RBP7.38□□□□□ -1.23
SYPL1-204ENST00000464029 CCDC173Q0VFZ6 552 aa7.38□□□□□ -1.23
SYPL1-204ENST00000464029 RABEP1Q15276 862 aa7.38□□□□□ -1.23
SYPL1-204ENST00000464029 ZNF296Q8WUU4 475 aaPredicted RBP7.38□□□□□ -1.23
SYPL1-204ENST00000464029 SLKQ9H2G2 1235 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms