RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 SDF4Q9BRK5 362 aa29.78■■■□□ 2.36
SURF1-203ENST00000463965 PDLIM7Q9NR12 457 aa29.78■■■□□ 2.36
SURF1-203ENST00000463965 PKD2L1Q9P0L9 805 aa29.78■■■□□ 2.36
SURF1-203ENST00000463965 GRIN2DO15399 1336 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 ATP9AO75110 1047 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 HOXD8P13378 290 aaPredicted RBP29.77■■■□□ 2.36
SURF1-203ENST00000463965 USP11P51784 963 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 HMGN5P82970 282 aaKnown RBP29.77■■■□□ 2.36
SURF1-203ENST00000463965 SETQ01105 290 aaPredicted RBP29.77■■■□□ 2.36
SURF1-203ENST00000463965 ST3GAL1Q11201 340 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 NBPF20Q3BBV1 942 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 FAM47CQ5HY64 1035 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 NFRKBQ6P4R8 1299 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 KRT25Q7Z3Z0 450 aa29.77■■■□□ 2.36
SURF1-203ENST00000463965 SP4Q02446 784 aa29.76■■■□□ 2.35
SURF1-203ENST00000463965 FAAP100Q0VG06 881 aa29.76■■■□□ 2.35
SURF1-203ENST00000463965 FAM126BQ8IXS8 530 aa29.76■■■□□ 2.35
SURF1-203ENST00000463965 BCAS3Q9H6U6 928 aa29.76■■■□□ 2.35
SURF1-203ENST00000463965 CCDC194A0A1B0GVG4 234 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 FAM86B1E9PN63 330 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 M0R2N6 131 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 FAM86B2P0C5J1 330 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 ZNF286BP0CG31 522 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 ARP10275 920 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 CIITAP33076 1130 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 PTPN11Q06124 597 aaPredicted RBP29.75■■■□□ 2.35
SURF1-203ENST00000463965 NONOQ15233 471 aaKnown RBP eCLIP29.75■■■□□ 2.35
SURF1-203ENST00000463965 NPY5RQ15761 445 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 TBCKQ8TEA7 893 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 GPR20Q99678 358 aa29.75■■■□□ 2.35
SURF1-203ENST00000463965 AGO4Q9HCK5 861 aaKnown RBP29.75■■■□□ 2.35
SURF1-203ENST00000463965 F2P00734 622 aa29.74■■■□□ 2.35
SURF1-203ENST00000463965 SUPT20HL2P0C7V6 817 aa29.74■■■□□ 2.35
SURF1-203ENST00000463965 KRT2P35908 639 aa29.74■■■□□ 2.35
SURF1-203ENST00000463965 PSEN2P49810 448 aa29.74■■■□□ 2.35
SURF1-203ENST00000463965 FAM184AQ8NB25 1140 aa29.74■■■□□ 2.35
SURF1-203ENST00000463965 KAT2BQ92831 832 aa29.74■■■□□ 2.35
SURF1-203ENST00000463965 JPH1Q9HDC5 661 aaPredicted RBP29.74■■■□□ 2.35
SURF1-203ENST00000463965 GJB4Q9NTQ9 266 aa29.74■■■□□ 2.35
SURF1-203ENST00000463965 NFASCO94856 1347 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 KIAA0355O15063 1070 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 RAG1P15918 1043 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 MFSD10Q14728 455 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 PRR16Q569H4 304 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 SH3RF1Q7Z6J0 888 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 SEPT1Q8WYJ6 367 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 SLC9A2Q9UBY0 812 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 SCN10AQ9Y5Y9 1956 aa29.73■■■□□ 2.35
SURF1-203ENST00000463965 CD4P01730 458 aa29.72■■■□□ 2.35
SURF1-203ENST00000463965 LGALS2P05162 132 aa29.72■■■□□ 2.35
SURF1-203ENST00000463965 KIAA0753Q2KHM9 967 aa29.72■■■□□ 2.35
SURF1-203ENST00000463965 CHRDL2Q6WN34 429 aa29.72■■■□□ 2.35
SURF1-203ENST00000463965 C7orf31Q8N865 590 aa29.72■■■□□ 2.35
SURF1-203ENST00000463965 ZNF215Q9UL58 517 aaPredicted RBP29.72■■■□□ 2.35
SURF1-203ENST00000463965 IGLV3-22A0A075B6J6 115 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 TRIM43BA6NCK2 446 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 B4GALT4O60513 344 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 MAGEA10P43363 369 aaPredicted RBP29.71■■■□□ 2.35
SURF1-203ENST00000463965 SAFBQ15424 915 aaKnown RBP eCLIP29.71■■■□□ 2.35
SURF1-203ENST00000463965 TRIM43Q96BQ3 446 aaPredicted RBP29.71■■■□□ 2.35
SURF1-203ENST00000463965 TMX3Q96JJ7 454 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 ZNF577Q9BSK1 485 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 TRPV6Q9H1D0 765 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 TCEAL9Q9UHQ7 104 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 NOD1Q9Y239 953 aa29.71■■■□□ 2.35
SURF1-203ENST00000463965 H3BRB1 525 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 IPO5O00410 1097 aaKnown RBP29.7■■■□□ 2.35
SURF1-203ENST00000463965 TCF7P36402 384 aaPredicted RBP29.7■■■□□ 2.35
SURF1-203ENST00000463965 FOSBP53539 338 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 MDM2Q00987 491 aaPredicted RBP29.7■■■□□ 2.35
SURF1-203ENST00000463965 UTP14CQ5TAP6 766 aaKnown RBP29.7■■■□□ 2.35
SURF1-203ENST00000463965 SESTD1Q86VW0 696 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 C8orf76Q96K31 380 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 C16orf70Q9BSU1 422 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 TUT1Q9H6E5 874 aaKnown RBP29.7■■■□□ 2.35
SURF1-203ENST00000463965 TBC1D22BQ9NU19 505 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 TBX21Q9UL17 535 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 KIF3AQ9Y496 699 aa29.7■■■□□ 2.35
SURF1-203ENST00000463965 HAS3O00219 553 aa29.69■■■□□ 2.34
SURF1-203ENST00000463965 MMP1P03956 469 aa29.69■■■□□ 2.34
SURF1-203ENST00000463965 INF2Q27J81 1249 aa29.69■■■□□ 2.34
SURF1-203ENST00000463965 KRT40Q6A162 431 aa29.69■■■□□ 2.34
SURF1-203ENST00000463965 GDF15Q99988 308 aa29.69■■■□□ 2.34
SURF1-203ENST00000463965 ITGB3BPQ13352 177 aaPredicted RBP29.68■■■□□ 2.34
SURF1-203ENST00000463965 MOXD1Q6UVY6 613 aa29.68■■■□□ 2.34
SURF1-203ENST00000463965 PIK3AP1Q6ZUJ8 805 aa29.68■■■□□ 2.34
SURF1-203ENST00000463965 OXER1Q8TDS5 423 aa29.68■■■□□ 2.34
SURF1-203ENST00000463965 NAP1L4Q99733 375 aaKnown RBP29.68■■■□□ 2.34
SURF1-203ENST00000463965 TRMT13Q9NUP7 481 aaKnown RBP29.68■■■□□ 2.34
SURF1-203ENST00000463965 CD2BP2O95400 341 aaKnown RBP29.67■■■□□ 2.34
SURF1-203ENST00000463965 TIMP1P01033 207 aa29.67■■■□□ 2.34
SURF1-203ENST00000463965 NEK8Q86SG6 692 aa29.67■■■□□ 2.34
SURF1-203ENST00000463965 PPP1R13LQ8WUF5 828 aa29.67■■■□□ 2.34
SURF1-203ENST00000463965 BADQ92934 168 aa29.67■■■□□ 2.34
SURF1-203ENST00000463965 HDAC6Q9UBN7 1215 aa29.67■■■□□ 2.34
SURF1-203ENST00000463965 COLQQ9Y215 455 aaPredicted RBP29.67■■■□□ 2.34
SURF1-203ENST00000463965 DOCK5Q9H7D0 1870 aa29.66■■■□□ 2.34
SURF1-203ENST00000463965 CYP3A7-CYP3A51PA0A087WV96 503 aa29.66■■■□□ 2.34
SURF1-203ENST00000463965 GSTTP1A0A1W2PQM5 241 aa29.66■■■□□ 2.34
SURF1-203ENST00000463965 CYP3A7P24462 503 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms