RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 JADE2Q9NQC1 790 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 PKD2L1Q9P0L9 805 aa14.85□□□□□ -0.03
XRN1-203ENST00000463916 EYSQ5T1H1 3165 aa14.84□□□□□ -0.03
XRN1-203ENST00000463916 FOSP01100 380 aaPredicted RBP14.84□□□□□ -0.03
XRN1-203ENST00000463916 SP4Q02446 784 aa14.84□□□□□ -0.03
XRN1-203ENST00000463916 MTMR1Q13613 665 aa14.84□□□□□ -0.03
XRN1-203ENST00000463916 PTGISQ16647 500 aa14.84□□□□□ -0.03
XRN1-203ENST00000463916 TMEM199Q8N511 208 aa14.84□□□□□ -0.03
XRN1-203ENST00000463916 VPS54Q9P1Q0 977 aa14.84□□□□□ -0.03
XRN1-203ENST00000463916 ESYT2A0FGR8 921 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 LGALS2P05162 132 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 SREBF1P36956 1147 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 ZNF200P98182 395 aaPredicted RBP14.83□□□□□ -0.03
XRN1-203ENST00000463916 AKAP17AQ02040 695 aaKnown RBP14.83□□□□□ -0.03
XRN1-203ENST00000463916 SCRN1Q12765 414 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 C8orf34Q49A92 452 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 TMEM240Q5SV17 173 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 TRIM50Q86XT4 487 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 TEX2Q8IWB9 1127 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 MXRA8Q9BRK3 442 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 GTF2IRD1Q9UHL9 959 aa14.83□□□□□ -0.03
XRN1-203ENST00000463916 CHD9Q3L8U1 2897 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 NOP56O00567 594 aaKnown RBP14.83□□□□□ -0.04
XRN1-203ENST00000463916 ARP10275 920 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 AK2P54819 239 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 PPIGQ13427 754 aaKnown RBP eCLIP14.83□□□□□ -0.043e-6■■□□□ 13.2
XRN1-203ENST00000463916 ZNF365Q70YC5 407 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 Q7L0L9 218 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 C7orf31Q8N865 590 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 RASGRP4Q8TDF6 673 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 CRYGNQ8WXF5 182 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 RNPC3Q96LT9 517 aaKnown RBP14.83□□□□□ -0.04
XRN1-203ENST00000463916 AIFM3Q96NN9 605 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 GLT8D2Q9H1C3 349 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 KCNH7Q9NS40 1196 aa14.83□□□□□ -0.04
XRN1-203ENST00000463916 H3BRB1 525 aa14.82□□□□□ -0.04
XRN1-203ENST00000463916 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
XRN1-203ENST00000463916 CEP55Q53EZ4 464 aa14.82□□□□□ -0.04
XRN1-203ENST00000463916 DHX38Q92620 1227 aaKnown RBP14.82□□□□□ -0.04
XRN1-203ENST00000463916 KATNAL1Q9BW62 490 aa14.82□□□□□ -0.04
XRN1-203ENST00000463916 TUT1Q9H6E5 874 aaKnown RBP14.82□□□□□ -0.04
XRN1-203ENST00000463916 EHMT1Q9H9B1 1298 aa14.82□□□□□ -0.04
XRN1-203ENST00000463916 C6orf50Q9HD87 102 aa14.82□□□□□ -0.04
XRN1-203ENST00000463916 IL23AQ9NPF7 189 aa14.82□□□□□ -0.04
XRN1-203ENST00000463916 FAM86B1E9PN63 330 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 FAM86B2P0C5J1 330 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 ARHGAP4P98171 946 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 SSRP1Q08945 709 aaKnown RBP14.81□□□□□ -0.04
XRN1-203ENST00000463916 FAM109BQ6ICB4 259 aaPredicted RBP14.81□□□□□ -0.04
XRN1-203ENST00000463916 WNT8BQ93098 351 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 CDHR1Q96JP9 859 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 GSTTP1A0A1W2PQM5 241 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 MEIS1O00470 390 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 CPLX1O14810 134 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 MAFGO15525 162 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 EDIL3O43854 480 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 UTP14CQ5TAP6 766 aaKnown RBP14.81□□□□□ -0.04
XRN1-203ENST00000463916 REXO1Q8N1G1 1221 aaKnown RBP14.81□□□□□ -0.04
XRN1-203ENST00000463916 GIMAP8Q8ND71 665 aaPredicted RBP14.81□□□□□ -0.04
XRN1-203ENST00000463916 CCDC12Q8WUD4 166 aaPredicted RBP14.81□□□□□ -0.04
XRN1-203ENST00000463916 NOD1Q9Y239 953 aa14.81□□□□□ -0.04
XRN1-203ENST00000463916 TRIP12Q14669 1992 aaPredicted RBP14.8□□□□□ -0.04
XRN1-203ENST00000463916 PFKFB2O60825 505 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 LARGE1O95461 756 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 CTDNEP1O95476 244 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 GNA11P29992 359 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 ITGB3BPQ13352 177 aaPredicted RBP14.8□□□□□ -0.04
XRN1-203ENST00000463916 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 TRIM22Q8IYM9 498 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 UIMC1Q96RL1 719 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 SLKQ9H2G2 1235 aaPredicted RBP14.8□□□□□ -0.04
XRN1-203ENST00000463916 CXXC1Q9P0U4 656 aaPredicted RBP14.8□□□□□ -0.04
XRN1-203ENST00000463916 SCN5AQ14524 2016 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 IGLV3-22A0A075B6J6 115 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 DEXIO95424 95 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 IQCF3P0C7M6 154 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 TCF7P36402 384 aaPredicted RBP14.8□□□□□ -0.04
XRN1-203ENST00000463916 NEK4P51957 841 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 GPNMBQ14956 572 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 NPY5RQ15761 445 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 ME3Q16798 604 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 GPR153Q6NV75 609 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 OTOP2Q7RTS6 562 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 NECAB1Q8N987 351 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 RNPEPQ9H4A4 650 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 AGO4Q9HCK5 861 aaKnown RBP14.8□□□□□ -0.04
XRN1-203ENST00000463916 SH3GLB2Q9NR46 395 aa14.8□□□□□ -0.04
XRN1-203ENST00000463916 CYP3A4P08684 503 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 SMIM10L2AP0DMW4 78 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 SMIM10L2BP0DMW5 78 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 HOXC8P31273 242 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 DEFB128Q7Z7B8 93 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 DEFB123Q8N688 67 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 GJB4Q9NTQ9 266 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 CHD7Q9P2D1 2997 aa14.79□□□□□ -0.04
XRN1-203ENST00000463916 GRXCR1A8MXD5 290 aa14.78□□□□□ -0.04
XRN1-203ENST00000463916 FGBP02675 491 aa14.78□□□□□ -0.04
XRN1-203ENST00000463916 ZNF76P36508 570 aa14.78□□□□□ -0.04
XRN1-203ENST00000463916 NLRP5P59047 1200 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms