RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 NOP56O00567 594 aaKnown RBP23.61■■□□□ 1.37
PDLIM4-205ENST00000463615 RABGGTBP53611 331 aa23.61■■□□□ 1.37
PDLIM4-205ENST00000463615 CYFIP1Q7L576 1253 aa23.61■■□□□ 1.37
PDLIM4-205ENST00000463615 RAB11FIP4Q86YS3 637 aa23.61■■□□□ 1.37
PDLIM4-205ENST00000463615 GAS2L1Q99501 681 aaPredicted RBP23.61■■□□□ 1.37
PDLIM4-205ENST00000463615 FTOQ9C0B1 505 aaKnown RBP eCLIP23.61■■□□□ 1.37
PDLIM4-205ENST00000463615 PRDM12Q9H4Q4 367 aa23.61■■□□□ 1.37
PDLIM4-205ENST00000463615 hCG_1984214I3L0E3 225 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 ZBTB43O43298 467 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 SORBS3O60504 671 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 NBNO60934 754 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 PPP1R18Q6NYC8 613 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 CNKSR3Q6P9H4 555 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 ZNF713Q8N859 430 aaPredicted RBP23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 WNT8BQ93098 351 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 UBIAD1Q9Y5Z9 338 aa23.6■■□□□ 1.37
PDLIM4-205ENST00000463615 MYO9BQ13459 2157 aa23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 hCG_1642624A0A1W2PR95 340 aa23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 MAFGO15525 162 aa23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 ITGB5P18084 799 aa23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 ZNF200P98182 395 aaPredicted RBP23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 RTN1Q16799 776 aa23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 FBXL16Q8N461 479 aa23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 CCDC82Q8N4S0 544 aa23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 FAM217BQ9NTX9 383 aaPredicted RBP23.59■■□□□ 1.37
PDLIM4-205ENST00000463615 EYSQ5T1H1 3165 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 C17orf102A2RUQ5 167 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 SPDYE3A6NKU9 549 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 KCNA2P16389 499 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 HSPA4P34932 840 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 ADGRE1Q14246 886 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 ZNF618Q5T7W0 954 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 PPP2R2DQ66LE6 453 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 WWC2Q6AWC2 1192 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 HEATR3Q7Z4Q2 680 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 HERC6Q8IVU3 1022 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 CCDC136Q96JN2 1154 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 TCEANC2Q96MN5 208 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 RNPEPQ9H4A4 650 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 PCDHA6Q9UN73 950 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 PCDHA8Q9Y5H6 950 aa23.58■■□□□ 1.37
PDLIM4-205ENST00000463615 ABHD14A-ACY1A0A1B0GW23 586 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 EFCAB14O75071 495 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 CAND2O75155 1236 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 SMIM10L2AP0DMW4 78 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 SMIM10L2BP0DMW5 78 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 MYOGP15173 224 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 WDR5P61964 334 aaKnown RBP23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 MBTPS1Q14703 1052 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 UBE2SQ16763 222 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 RIC8AQ9NPQ8 531 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 ZNF215Q9UL58 517 aaPredicted RBP23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 EMSYQ7Z589 1322 aa23.57■■□□□ 1.36
PDLIM4-205ENST00000463615 ATP9AO75110 1047 aa23.56■■□□□ 1.36
PDLIM4-205ENST00000463615 ADAM17P78536 824 aa23.56■■□□□ 1.36
PDLIM4-205ENST00000463615 TYW1BQ6NUM6 668 aa23.56■■□□□ 1.36
PDLIM4-205ENST00000463615 ATP6V0A1Q93050 837 aa23.56■■□□□ 1.36
PDLIM4-205ENST00000463615 GLT8D2Q9H1C3 349 aa23.56■■□□□ 1.36
PDLIM4-205ENST00000463615 EHMT1Q9H9B1 1298 aa23.56■■□□□ 1.36
PDLIM4-205ENST00000463615 JADE2Q9NQC1 790 aa23.56■■□□□ 1.36
PDLIM4-205ENST00000463615 NID2Q14112 1375 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 KLF18A0A0U1RQI7 1052 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 KIF28PB7ZC32 967 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 EPB41L2O43491 1005 aaKnown RBP23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 FOSP01100 380 aaPredicted RBP23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 CA3P07451 260 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 GNAT1P11488 350 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 POU3F3P20264 500 aaPredicted RBP23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 KCNJ6P48051 423 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 USP38Q8NB14 1042 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 COL25A1Q9BXS0 654 aaPredicted RBP23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 AGXT2Q9BYV1 514 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 BARHL2Q9NY43 387 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 CHD7Q9P2D1 2997 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 TELO2Q9Y4R8 837 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 V9GY48 417 aaPredicted RBP23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 DOCK5Q9H7D0 1870 aa23.55■■□□□ 1.36
PDLIM4-205ENST00000463615 GOLGA8AA7E2F4 631 aa23.54■■□□□ 1.36
PDLIM4-205ENST00000463615 GOLGA8BA8MQT2 603 aa23.54■■□□□ 1.36
PDLIM4-205ENST00000463615 CDC27P30260 824 aa23.54■■□□□ 1.36
PDLIM4-205ENST00000463615 MKRN4PQ13434 485 aaPredicted RBP23.54■■□□□ 1.36
PDLIM4-205ENST00000463615 MTMR1Q13613 665 aa23.54■■□□□ 1.36
PDLIM4-205ENST00000463615 SNX14Q9Y5W7 946 aa23.54■■□□□ 1.36
PDLIM4-205ENST00000463615 PRUNE2Q8WUY3 3088 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 CCDC196A0A1B0GTZ2 297 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 RSPH10B2B2RC85 870 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 STXBP3O00186 592 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 TREHO43280 583 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 LGR5O75473 907 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 RSPH10BP0C881 870 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 NAPAP54920 295 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 TCTN1Q2MV58 587 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 TRIM50Q86XT4 487 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 SEPT1Q8WYJ6 367 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 NRCAMQ92823 1304 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 PTPRSQ13332 1948 aa23.53■■□□□ 1.36
PDLIM4-205ENST00000463615 GSTTP1A0A1W2PQM5 241 aa23.52■■□□□ 1.36
PDLIM4-205ENST00000463615 REC8O95072 547 aa23.52■■□□□ 1.36
PDLIM4-205ENST00000463615 TCF7P36402 384 aaPredicted RBP23.52■■□□□ 1.36
PDLIM4-205ENST00000463615 THPOP40225 353 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms