RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 DEFB103AP81534 67 aa23.8■■□□□ 1.4
COMMD2-201ENST00000463077 CDC37Q16543 378 aaPredicted RBP23.8■■□□□ 1.4
COMMD2-201ENST00000463077 TCTN1Q2MV58 587 aa23.8■■□□□ 1.4
COMMD2-201ENST00000463077 LRRC8DQ7L1W4 858 aa23.8■■□□□ 1.4
COMMD2-201ENST00000463077 SRBD1Q8N5C6 995 aaKnown RBP23.8■■□□□ 1.4
COMMD2-201ENST00000463077 RAD9AQ99638 391 aa23.8■■□□□ 1.4
COMMD2-201ENST00000463077 UPF2Q9HAU5 1272 aaKnown RBP23.8■■□□□ 1.4
COMMD2-201ENST00000463077 VAT1LQ9HCJ6 419 aa23.8■■□□□ 1.4
COMMD2-201ENST00000463077 PIEZO1Q92508 2521 aa23.8■■□□□ 1.4
COMMD2-201ENST00000463077 COL4A4P53420 1690 aaPredicted RBP23.79■■□□□ 1.4
COMMD2-201ENST00000463077 ABHD14A-ACY1A0A1B0GW23 586 aa23.79■■□□□ 1.4
COMMD2-201ENST00000463077 PLEKHA8P1O95397 391 aa23.79■■□□□ 1.4
COMMD2-201ENST00000463077 PDIA3P30101 505 aaKnown RBP23.79■■□□□ 1.4
COMMD2-201ENST00000463077 ARHGAP1Q07960 439 aa23.79■■□□□ 1.4
COMMD2-201ENST00000463077 TMTC3Q6ZXV5 915 aa23.79■■□□□ 1.4
COMMD2-201ENST00000463077 GDPD5Q8WTR4 605 aa23.79■■□□□ 1.4
COMMD2-201ENST00000463077 TBC1D32Q96NH3 1257 aa23.79■■□□□ 1.4
COMMD2-201ENST00000463077 ZBED2Q9BTP6 218 aa23.79■■□□□ 1.4
COMMD2-201ENST00000463077 RBM28Q9NW13 759 aaKnown RBP23.79■■□□□ 1.4
COMMD2-201ENST00000463077 GH1P01241 217 aa23.78■■□□□ 1.4
COMMD2-201ENST00000463077 CKBP12277 381 aa23.78■■□□□ 1.4
COMMD2-201ENST00000463077 FUT2Q10981 343 aa23.78■■□□□ 1.4
COMMD2-201ENST00000463077 RTN1Q16799 776 aa23.78■■□□□ 1.4
COMMD2-201ENST00000463077 QRICH1Q2TAL8 776 aa23.78■■□□□ 1.4
COMMD2-201ENST00000463077 ZNF274Q96GC6 653 aaPredicted RBP23.78■■□□□ 1.4
COMMD2-201ENST00000463077 TGS1Q96RS0 853 aaKnown RBP23.78■■□□□ 1.4
COMMD2-201ENST00000463077 GTF2IRD1Q9UHL9 959 aa23.78■■□□□ 1.4
COMMD2-201ENST00000463077 LINC01553A4QN01 128 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 GOLGA8AA7E2F4 631 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 GOLGA8BA8MQT2 603 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 ZBTB5O15062 677 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 CDC27P30260 824 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 NEK4P51957 841 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 LY6KQ17RY6 165 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 TRAF7Q6Q0C0 670 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 TBC1D5Q92609 795 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 PIGSQ96S52 555 aa23.77■■□□□ 1.4
COMMD2-201ENST00000463077 UBE2ZQ9H832 354 aaPredicted RBP23.77■■□□□ 1.4
COMMD2-201ENST00000463077 MUC6Q6W4X9 2439 aa23.76■■□□□ 1.39
COMMD2-201ENST00000463077 DHX16O60231 1041 aaKnown RBP23.76■■□□□ 1.39
COMMD2-201ENST00000463077 PPP1R11O60927 126 aaPredicted RBP23.76■■□□□ 1.39
COMMD2-201ENST00000463077 EFCAB14O75071 495 aa23.76■■□□□ 1.39
COMMD2-201ENST00000463077 AK2P54819 239 aa23.76■■□□□ 1.39
COMMD2-201ENST00000463077 CHMP4BP1P59074 171 aa23.76■■□□□ 1.39
COMMD2-201ENST00000463077 TRIM71Q2Q1W2 868 aaKnown RBP23.76■■□□□ 1.39
COMMD2-201ENST00000463077 LEXMQ3ZCV2 418 aa23.76■■□□□ 1.39
COMMD2-201ENST00000463077 CMTR1Q8N1G2 835 aaKnown RBP23.76■■□□□ 1.39
COMMD2-201ENST00000463077 TAAR1Q96RJ0 339 aa23.76■■□□□ 1.39
COMMD2-201ENST00000463077 HDAC6Q9UBN7 1215 aa23.76■■□□□ 1.39
COMMD2-201ENST00000463077 PNMA6FA0A0J9YX94 578 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 HAS3O00219 553 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 ADD1P35611 737 aaKnown RBP23.75■■□□□ 1.39
COMMD2-201ENST00000463077 METAP2P50579 478 aaKnown RBP eCLIP23.75■■□□□ 1.39
COMMD2-201ENST00000463077 ANKRD1Q15327 319 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 SEPT14Q6ZU15 432 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 FBXO11Q86XK2 927 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 FAM178BQ8IXR5 827 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 SYTL5Q8TDW5 730 aaPredicted RBP23.75■■□□□ 1.39
COMMD2-201ENST00000463077 NSUN6Q8TEA1 469 aaKnown RBP23.75■■□□□ 1.39
COMMD2-201ENST00000463077 EMID1Q96A84 441 aaPredicted RBP23.75■■□□□ 1.39
COMMD2-201ENST00000463077 IWS1Q96ST2 819 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 LARP6Q9BRS8 491 aaKnown RBP23.75■■□□□ 1.39
COMMD2-201ENST00000463077 COL20A1Q9P218 1284 aa23.75■■□□□ 1.39
COMMD2-201ENST00000463077 CCDC196A0A1B0GTZ2 297 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 FAM86C2PA6NEL3 165 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 PTK7Q13308 1070 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 IKBKEQ14164 716 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 DGKDQ16760 1214 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 USH1GQ495M9 461 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.74■■□□□ 1.39
COMMD2-201ENST00000463077 AMNQ9BXJ7 453 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 DDX41Q9UJV9 622 aaKnown RBP23.74■■□□□ 1.39
COMMD2-201ENST00000463077 TPCN1Q9ULQ1 816 aa23.74■■□□□ 1.39
COMMD2-201ENST00000463077 NAP1L2Q9ULW6 460 aaPredicted RBP23.74■■□□□ 1.39
COMMD2-201ENST00000463077 MKRN4PQ13434 485 aaPredicted RBP23.73■■□□□ 1.39
COMMD2-201ENST00000463077 MBTPS1Q14703 1052 aa23.73■■□□□ 1.39
COMMD2-201ENST00000463077 STXBP2Q15833 593 aa23.73■■□□□ 1.39
COMMD2-201ENST00000463077 NTRK3Q16288 839 aa23.73■■□□□ 1.39
COMMD2-201ENST00000463077 RRP36Q96EU6 259 aaKnown RBP23.73■■□□□ 1.39
COMMD2-201ENST00000463077 KIAA1217Q5T5P2 1943 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 F2P00734 622 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 PSEN2P49810 448 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 HOMER1Q86YM7 354 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 GJD3Q8N144 294 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 C7orf31Q8N865 590 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 WNT8BQ93098 351 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 MTUS1Q9ULD2 1270 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 ABCB11O95342 1321 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 CNTNAP5Q8WYK1 1306 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 SIP14410 1827 aa23.72■■□□□ 1.39
COMMD2-201ENST00000463077 PRR33A8MZF0 331 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 HOXD8P13378 290 aaPredicted RBP23.71■■□□□ 1.39
COMMD2-201ENST00000463077 TRAF1Q13077 416 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 RABEP1Q15276 862 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 ZNF618Q5T7W0 954 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 CCDC82Q8N4S0 544 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 RMDN3Q96TC7 470 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 KATNAL1Q9BW62 490 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 INSL6Q9Y581 213 aa23.71■■□□□ 1.39
COMMD2-201ENST00000463077 EIF3JO75822 258 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms