RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 KCNK3O14649 394 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CETN3O15182 167 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 MEFVO15553 781 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CYTH3O43739 400 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SLC37A4O43826 429 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 FLOT1O75955 427 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 FAM107AO95990 144 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SSBP05455 408 aaKnown RBP eCLIP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 KRT18P05783 430 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 GLI1P08151 1106 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 RASA1P20936 1047 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 LSP1P33241 339 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 RDXP35241 583 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 BTDP43251 543 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CARSP49589 748 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ATP1A2P50993 1020 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 DNA2P51530 1060 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 MNAT1P51948 309 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PPP4CP60510 307 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 POLR2FP61218 127 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 MRPS25P82663 173 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ATP2B2Q01814 1243 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 EVX2Q03828 476 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 GFPT1Q06210 699 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 EHHADHQ08426 723 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PDE4CQ08493 712 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 BIRC3Q13489 604 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 HLTFQ14527 1009 aaKnown RBP eCLIP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC41Q15345 812 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CLUL1Q15846 466 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 DDB1Q16531 1140 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CDC37Q16543 378 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PTGISQ16647 500 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 KIAA0753Q2KHM9 967 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SLC35G1Q2M3R5 365 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ZCWPW2Q504Y3 356 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ASPRV1Q53RT3 343 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CEP85LQ5SZL2 805 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 FAM83BQ5T0W9 1011 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SWT1Q5T5J6 900 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 EMC10Q5UCC4 262 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 NAA35Q5VZE5 725 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 HGSNATQ68CP4 663 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 KCTD16Q68DU8 428 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TTC19Q6DKK2 380 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PPP4R3AQ6IN85 833 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 RUFY4Q6ZNE9 571 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 BICDL1Q6ZP65 573 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC121Q6ZUS5 278 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 C16orf86Q6ZW13 317 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ARMC9Q7Z3E5 817 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TMC4Q7Z404 712 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 NLRP14Q86W24 1093 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 NBPF5PQ86XG9 351 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 GPIHBP1Q8IV16 184 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 FMNL3Q8IVF7 1028 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 MAPKAPK5Q8IW41 473 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SLF2Q8IX21 1173 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 KLHL7Q8IXQ5 586 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TEX11Q8IYF3 940 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 IQCKQ8N0W5 287 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SH2D3CQ8N5H7 860 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PRPF38AQ8NAV1 312 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 USP38Q8NB14 1042 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SLC44A5Q8NCS7 719 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 NEDD1Q8NHV4 660 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF473Q8WTR7 871 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TGFBRAP1Q8WUH2 860 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 LMBR1Q8WVP7 490 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CASKIN2Q8WXE0 1202 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TBC1D5Q92609 795 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ACSBG1Q96GR2 724 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 MS4A14Q96JA4 679 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CALR3Q96L12 384 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 RNPC3Q96LT9 517 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 INPP4AQ96PE3 977 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PNMA5Q96PV4 448 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 MTMR9Q96QG7 549 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SPAG5Q96R06 1193 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PIGSQ96S52 555 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 CEP89Q96ST8 783 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SETDB2Q96T68 719 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 NCAPGQ9BPX3 1015 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 GLT8D2Q9H1C3 349 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ISCUQ9H1K1 167 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TAF1DQ9H5J8 278 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 RABEP2Q9H5N1 569 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 SLITRK6Q9H5Y7 841 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ACTR5Q9H9F9 607 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TMBIM4Q9HC24 238 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 NLRC4Q9NPP4 1024 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PLCB1Q9NQ66 1216 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PLSCR2Q9NRY7 297 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PANK4Q9NVE7 773 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 GEMIN8Q9NWZ8 242 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 EHD2Q9NZN4 543 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 DDX25Q9UHL0 483 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PLAAQ9Y263 795 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 LEMD3Q9Y2U8 911 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 THRAP3Q9Y2W1 955 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms