RNA–Protein interactions for RNA: ENST00000462457.1

SGSM3-205, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-205ENST00000462457 CD4P01730 458 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 CLK2P49760 499 aaKnown RBP17.12■□□□□ 0.33
SGSM3-205ENST00000462457 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
SGSM3-205ENST00000462457 BFSP2Q13515 415 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 TRIM29Q14134 588 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 PTGISQ16647 500 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 KIAA0753Q2KHM9 967 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 MFSD5Q6N075 450 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
SGSM3-205ENST00000462457 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
SGSM3-205ENST00000462457 BRMS1Q9HCU9 246 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 GRIN2DO15399 1336 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 STK36Q9NRP7 1315 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 DOCK5Q9H7D0 1870 aa17.12■□□□□ 0.33
SGSM3-205ENST00000462457 H3BRB1 525 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 F2P00734 622 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 GNAT1P11488 350 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 ITGB5P18084 799 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
SGSM3-205ENST00000462457 NIPA1Q7RTP0 329 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 RPUSD2Q8IZ73 545 aaKnown RBP17.11■□□□□ 0.33
SGSM3-205ENST00000462457 BLIDQ8IZY5 108 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
SGSM3-205ENST00000462457 PRO3102Q9H379 93 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 TUT1Q9H6E5 874 aaKnown RBP17.11■□□□□ 0.33
SGSM3-205ENST00000462457 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 TRMT13Q9NUP7 481 aaKnown RBP17.11■□□□□ 0.33
SGSM3-205ENST00000462457 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
SGSM3-205ENST00000462457 LIMCH1Q9UPQ0 1083 aa17.11■□□□□ 0.33
SGSM3-205ENST00000462457 ST18O60284 1047 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 LGALS2P05162 132 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 SESTD1Q86VW0 696 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 SEPT1Q8WYJ6 367 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 GLG1Q92896 1179 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 GTF3C6Q969F1 213 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 GPR20Q99678 358 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 AZI2Q9H6S1 392 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
SGSM3-205ENST00000462457 SLC9A2Q9UBY0 812 aa17.1■□□□□ 0.33
SGSM3-205ENST00000462457 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
SGSM3-205ENST00000462457 CYP3A4P08684 503 aa17.09■□□□□ 0.33
SGSM3-205ENST00000462457 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
SGSM3-205ENST00000462457 CYP2C18P33260 490 aa17.09■□□□□ 0.33
SGSM3-205ENST00000462457 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
SGSM3-205ENST00000462457 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
SGSM3-205ENST00000462457 PSRC1Q6PGN9 363 aaPredicted RBP17.09■□□□□ 0.33
SGSM3-205ENST00000462457 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
SGSM3-205ENST00000462457 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
SGSM3-205ENST00000462457 KAT6AQ92794 2004 aa17.08■□□□□ 0.33
SGSM3-205ENST00000462457 NFASCO94856 1347 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 C17orf102A2RUQ5 167 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 CYP2C9P11712 490 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 KCNA2P16389 499 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 USP11P51784 963 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 RABEP1Q15276 862 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 ME3Q16798 604 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 KRT25Q7Z3Z0 450 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 CAGE1Q8TC20 777 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 RASGRP4Q8TDF6 673 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 KAT2BQ92831 832 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
SGSM3-205ENST00000462457 ZNF577Q9BSK1 485 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 NOC4LQ9BVI4 516 aaKnown RBP17.08■□□□□ 0.32
SGSM3-205ENST00000462457 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.32
SGSM3-205ENST00000462457 MEIS1O00470 390 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 ATP9AO75110 1047 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
SGSM3-205ENST00000462457 CCL23P55773 120 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 NONOQ15233 471 aaKnown RBP eCLIP17.07■□□□□ 0.32
SGSM3-205ENST00000462457 PRR16Q569H4 304 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 GDF6Q6KF10 455 aaPredicted RBP17.07■□□□□ 0.32
SGSM3-205ENST00000462457 DAGLBQ8NCG7 672 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 C16orf70Q9BSU1 422 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 AGO4Q9HCK5 861 aaKnown RBP17.07■□□□□ 0.32
SGSM3-205ENST00000462457 IL23AQ9NPF7 189 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
SGSM3-205ENST00000462457 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
SGSM3-205ENST00000462457 DDX39AO00148 427 aaKnown RBP17.06■□□□□ 0.32
SGSM3-205ENST00000462457 HAS3O00219 553 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
SGSM3-205ENST00000462457 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
SGSM3-205ENST00000462457 PFKMP08237 780 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 ARP10275 920 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 ACTN1P12814 892 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 CSF2RAP15509 400 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 ITGB8P26012 769 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 RFC2P35250 354 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 SHHQ15465 462 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 LRIT3Q3SXY7 679 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 FAM160B1Q5W0V3 765 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 CYP2W1Q8TAV3 490 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 AFAP1L1Q8TED9 768 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 PPP1R13LQ8WUF5 828 aa17.06■□□□□ 0.32
SGSM3-205ENST00000462457 ATP6V0A1Q93050 837 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms