RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 STAT6P42226 847 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 MEA1Q16626 185 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 WDR93Q6P2C0 686 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CTAGE6Q86UF2 777 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CTAGE4Q8IX94 777 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 KLRG1Q96E93 195 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 AK8Q96MA6 479 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 PNKPQ96T60 521 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CUEDC2Q9H467 287 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 HAUS4Q9H6D7 363 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 KBTBD4Q9NVX7 518 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 PUF60Q9UHX1 559 aaKnown RBP13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CAPN11Q9UMQ6 739 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 ERICH4A6NGS2 130 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 PIK3CDO00329 1044 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 PTPRAP18433 802 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 VCAM1P19320 739 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 TECP42680 631 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-204ENST00000461897 DLK2Q6UY11 383 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 TRAPPC11Q7Z392 1133 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 GIMAP8Q8ND71 665 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-204ENST00000461897 LRRC15Q8TF66 581 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 WDR18Q9BV38 432 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 DDX25Q9UHL0 483 aaKnown RBP13.83□□□□□ -0.2
COL4A6-204ENST00000461897 GDAQ9Y2T3 454 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 OTOFQ9HC10 1997 aa13.83□□□□□ -0.2
COL4A6-204ENST00000461897 H3BQF6 201 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 TULP2O00295 520 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 GCFC2P16383 781 aaKnown RBP13.82□□□□□ -0.2
COL4A6-204ENST00000461897 HOXA13P31271 388 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-204ENST00000461897 UBA7P41226 1012 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 TXKP42681 527 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL4A6-204ENST00000461897 UBXN1Q04323 297 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 SPP2Q13103 211 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 COBLL1Q53SF7 1204 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 RETREG2Q8NC44 543 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 HAS1Q92839 578 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
COL4A6-204ENST00000461897 MMTAG2Q9BU76 263 aaKnown RBP13.82□□□□□ -0.2
COL4A6-204ENST00000461897 TTYH3Q9C0H2 523 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 MYO6Q9UM54 1294 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 ZNF536O15090 1300 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 TTC26A0AVF1 554 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 ABL1P00519 1130 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 SREBF1P36956 1147 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 PPP1R2P41236 205 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 DNM2P50570 870 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 USP11P51784 963 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 HNRNPH2P55795 449 aaKnown RBP13.82□□□□□ -0.2
COL4A6-204ENST00000461897 ARHGAP4P98171 946 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 TRAF1Q13077 416 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 MCTP2Q6DN12 878 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 TTI2Q6NXR4 508 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 CABP7Q86V35 215 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 LDHDQ86WU2 507 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 MBOAT7Q96N66 472 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 SLF1Q9BQI6 1058 aa13.82□□□□□ -0.2
COL4A6-204ENST00000461897 ZCCHC17Q9NP64 241 aaKnown RBP13.82□□□□□ -0.2
COL4A6-204ENST00000461897 RLFQ13129 1914 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 WDR90Q96KV7 1748 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 CYP3A7-CYP3A51PA0A087WV96 503 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 PSMA7O14818 248 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 EIF3JO75822 258 aaKnown RBP13.81□□□□□ -0.2
COL4A6-204ENST00000461897 FOSP01100 380 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-204ENST00000461897 CYP3A7P24462 503 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 USP14P54578 494 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 BACE1P56817 501 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 CDK17Q00537 523 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 STIM1Q13586 685 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 PAPD7Q5XG87 772 aaKnown RBP13.81□□□□□ -0.2
COL4A6-204ENST00000461897 PRPF38AQ8NAV1 312 aaKnown RBP13.81□□□□□ -0.2
COL4A6-204ENST00000461897 ZNF280CQ8ND82 737 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL4A6-204ENST00000461897 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 GJA10Q969M2 543 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 CHP1Q99653 195 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 NAP1L4Q99733 375 aaKnown RBP13.81□□□□□ -0.2
COL4A6-204ENST00000461897 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 TANGO6Q9C0B7 1094 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 PICK1Q9NRD5 415 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 ADAM21Q9UKJ8 722 aa13.81□□□□□ -0.2
COL4A6-204ENST00000461897 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
COL4A6-204ENST00000461897 POTEMA6NI47 508 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 ADM5C9JUS6 153 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 ICAM1P05362 532 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 VSNL1P62760 191 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 SUPT20HL1Q3ZLR7 823 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 FIGNQ5HY92 759 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 NOL9Q5SY16 702 aaKnown RBP13.8□□□□□ -0.2
COL4A6-204ENST00000461897 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 MOXD1Q6UVY6 613 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 TEX2Q8IWB9 1127 aa13.8□□□□□ -0.2
COL4A6-204ENST00000461897 EHBP1Q8NDI1 1231 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms