RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 KRT32Q14532 448 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 MFSD10Q14728 455 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 KIAA0753Q2KHM9 967 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 USP17L6PQ6QN14 398 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 METTL7BQ6UX53 244 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 MAFAQ8NHW3 353 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-207ENST00000461798 SMARCC2Q8TAQ2 1214 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 PIBF1Q8WXW3 757 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
BRCA1-207ENST00000461798 GPKOWQ92917 476 aaPredicted RBP eCLIP10.55□□□□□ -0.72
BRCA1-207ENST00000461798 CUL5Q93034 780 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-207ENST00000461798 BCAS3Q9H6U6 928 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 PSTPIP2Q9H939 334 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 MLXIPQ9HAP2 919 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 PCDHA11Q9Y5I1 949 aa10.55□□□□□ -0.72
BRCA1-207ENST00000461798 LAMA2P24043 3122 aaKnown RBP10.55□□□□□ -0.72
BRCA1-207ENST00000461798 DLL1O00548 723 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 BAIAP3O94812 1187 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 CXCL10P02778 98 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 ZNF286BP0CG31 522 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 FOSL2P15408 326 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 ATP2A2P16615 1042 aaKnown RBP10.54□□□□□ -0.72
BRCA1-207ENST00000461798 RXRAP19793 462 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 RCAN1P53805 252 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 FUT2Q10981 343 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 TRIM71Q2Q1W2 868 aaKnown RBP10.54□□□□□ -0.72
BRCA1-207ENST00000461798 TRAF7Q6Q0C0 670 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 APOA5Q6Q788 366 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 SYNE3Q6ZMZ3 975 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 DEFB128Q7Z7B8 93 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 NLRX1Q86UT6 975 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
BRCA1-207ENST00000461798 CMTR1Q8N1G2 835 aaKnown RBP10.54□□□□□ -0.72
BRCA1-207ENST00000461798 ALG1Q9BT22 464 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 USP26Q9BXU7 913 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 LRRC2Q9BYS8 371 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 RBM28Q9NW13 759 aaKnown RBP10.54□□□□□ -0.72
BRCA1-207ENST00000461798 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 YBX2Q9Y2T7 364 aaKnown RBP10.54□□□□□ -0.72
BRCA1-207ENST00000461798 MYH6P13533 1939 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 KIAA1217Q5T5P2 1943 aa10.54□□□□□ -0.72
BRCA1-207ENST00000461798 H3BRB1 525 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 MAFGO15525 162 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 HMGB1P09429 215 aaKnown RBP10.53□□□□□ -0.72
BRCA1-207ENST00000461798 CKBP12277 381 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 CHMP4BP1P59074 171 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 HIC1Q14526 733 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 ADCK5Q3MIX3 580 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 LRRC8DQ7L1W4 858 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 SERINC5Q86VE9 423 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 FBXL16Q8N461 479 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 GIMAP8Q8ND71 665 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-207ENST00000461798 GPRASP2Q96D09 838 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 CDHR1Q96JP9 859 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 SLC9A7Q96T83 725 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 GPR20Q99678 358 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 NKX2-4Q9H2Z4 354 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 TUT1Q9H6E5 874 aaKnown RBP10.53□□□□□ -0.72
BRCA1-207ENST00000461798 SLC28A3Q9HAS3 691 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 RTEL1Q9NZ71 1219 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 BRPF3Q9ULD4 1205 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 UBIAD1Q9Y5Z9 338 aa10.53□□□□□ -0.72
BRCA1-207ENST00000461798 ZBBXA8MT70 800 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 ZBTB43O43298 467 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 NBNO60934 754 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 LGALS2P05162 132 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 RABGGTBP53611 331 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 ZNF200P98182 395 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-207ENST00000461798 CYFIP1Q7L576 1253 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 MICU3Q86XE3 530 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 RAB11FIP4Q86YS3 637 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 CCDC82Q8N4S0 544 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 WNT8BQ93098 351 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 FTOQ9C0B1 505 aaKnown RBP eCLIP10.52□□□□□ -0.73
BRCA1-207ENST00000461798 RNPEPQ9H4A4 650 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 PRDM12Q9H4Q4 367 aa10.52□□□□□ -0.73
BRCA1-207ENST00000461798 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-207ENST00000461798 CUL9Q8IWT3 2517 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 ABHD14A-ACY1A0A1B0GW23 586 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 C17orf102A2RUQ5 167 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 SPDYE3A6NKU9 549 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 hCG_1984214I3L0E3 225 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 NOP56O00567 594 aaKnown RBP10.51□□□□□ -0.73
BRCA1-207ENST00000461798 EPB41L2O43491 1005 aaKnown RBP10.51□□□□□ -0.73
BRCA1-207ENST00000461798 SORBS3O60504 671 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 EFCAB14O75071 495 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 ATP9AO75110 1047 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 CAND2O75155 1236 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 SMIM10L2AP0DMW4 78 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 SMIM10L2BP0DMW5 78 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 PYGBP11216 843 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 KCNA2P16389 499 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 ITGB5P18084 799 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 POU3F3P20264 500 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-207ENST00000461798 HSPA4P34932 840 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 ADAM17P78536 824 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 ADGRE1Q14246 886 aa10.51□□□□□ -0.73
BRCA1-207ENST00000461798 RTN1Q16799 776 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms