RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 SPATC1Q76KD6 591 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 TRIM48Q8IWZ4 208 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 IFNL3Q8IZI9 196 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 TXNDC5Q8NBS9 432 aaKnown RBP6.68□□□□□ -1.34
UBA3-204ENST00000461522 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBA3-204ENST00000461522 NBPF4Q96M43 638 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 TMEM209Q96SK2 561 aa6.68□□□□□ -1.34
UBA3-204ENST00000461522 MROH6A6NGR9 719 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 SLC27A2O14975 620 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 ADCY3O60266 1144 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 NFKB2Q00653 900 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 SPATS1Q496A3 300 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 PROSER1Q86XN7 944 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 UHMK1Q8TAS1 419 aaKnown RBP6.67□□□□□ -1.34
UBA3-204ENST00000461522 ZSWIM3Q96MP5 696 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 CLIC6Q96NY7 704 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 TANGO6Q9C0B7 1094 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 PDGFDQ9GZP0 370 aaPredicted RBP6.67□□□□□ -1.34
UBA3-204ENST00000461522 CCDC113Q9H0I3 377 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 ASXL2Q76L83 1435 aa6.67□□□□□ -1.34
UBA3-204ENST00000461522 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
UBA3-204ENST00000461522 U2SURPO15042 1029 aaKnown RBP6.66□□□□□ -1.34
UBA3-204ENST00000461522 CLEC4DQ8WXI8 215 aa6.66□□□□□ -1.34
UBA3-204ENST00000461522 C8orf37Q96NL8 207 aa6.66□□□□□ -1.34
UBA3-204ENST00000461522 WRNIP1Q96S55 665 aa6.66□□□□□ -1.34
UBA3-204ENST00000461522 RBM15Q96T37 977 aaKnown RBP eCLIP6.66□□□□□ -1.34
UBA3-204ENST00000461522 K7ESM1 405 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 CYP7B1O75881 506 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 SOD2P04179 222 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 ITGB3P05106 788 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 GNAT1P11488 350 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 ATP2B1P20020 1258 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 MLLT6P55198 1093 aaPredicted RBP6.65□□□□□ -1.34
UBA3-204ENST00000461522 SPIRE1Q08AE8 756 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 PRAMEF18Q5VWM3 479 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 TMC5Q6UXY8 1006 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 DPH6Q7L8W6 267 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 LGI4Q8N135 537 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 ZCCHC14Q8WYQ9 949 aaKnown RBP6.65□□□□□ -1.34
UBA3-204ENST00000461522 LCORQ96JN0 433 aaPredicted RBP6.65□□□□□ -1.34
UBA3-204ENST00000461522 YTHDC1Q96MU7 727 aaKnown RBP6.65□□□□□ -1.34
UBA3-204ENST00000461522 KCNJ15Q99712 375 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 RBPJLQ9UBG7 517 aa6.65□□□□□ -1.34
UBA3-204ENST00000461522 NKRFO15226 690 aaKnown RBP eCLIP6.64□□□□□ -1.35
UBA3-204ENST00000461522 ADRB1P08588 477 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 COL6A2P12110 1019 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 IL13P35225 146 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 GRIN1Q05586 938 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 TUSC3Q13454 348 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 MTERF2Q49AM1 385 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 BORAQ6PGQ7 559 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 FAM124AQ86V42 546 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 SCUBE1Q8IWY4 988 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 RBM12BQ8IXT5 1001 aaKnown RBP6.64□□□□□ -1.35
UBA3-204ENST00000461522 SIRPGQ9P1W8 387 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 INVSQ9Y283 1065 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 TELO2Q9Y4R8 837 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 CCDC180Q9P1Z9 1646 aa6.64□□□□□ -1.35
UBA3-204ENST00000461522 FAM47E-STBD1D6RA91 191 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 PLATP00750 562 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 LTFP02788 710 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 FAHP16930 419 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 EPHA5P54756 1037 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 SSRP1Q08945 709 aaKnown RBP6.63□□□□□ -1.35
UBA3-204ENST00000461522 SERINC3Q13530 473 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 TBC1D10BQ4KMP7 808 aaPredicted RBP6.63□□□□□ -1.35
UBA3-204ENST00000461522 FOXB2Q5VYV0 432 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 HHIPL2Q6UWX4 724 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 DTX3Q8N9I9 347 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 ZBTB38Q8NAP3 1195 aaPredicted RBP6.63□□□□□ -1.35
UBA3-204ENST00000461522 ARMC5Q96C12 935 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 MBD6Q96DN6 1003 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 ALG1Q9BT22 464 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 IPPKQ9H8X2 491 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 L2HGDHQ9H9P8 463 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 PFDN2Q9UHV9 154 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 CROTQ9UKG9 612 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 DSEQ9UL01 958 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 TRAF6Q9Y4K3 522 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 NUB1Q9Y5A7 615 aa6.63□□□□□ -1.35
UBA3-204ENST00000461522 TRBV23-1A0A0A0MS06 115 aa6.62□□□□□ -1.35
UBA3-204ENST00000461522 B4GALT3O60512 393 aa6.62□□□□□ -1.35
UBA3-204ENST00000461522 DIAPH1O60610 1272 aaKnown RBP6.62□□□□□ -1.35
UBA3-204ENST00000461522 C6orf222P0C671 652 aaPredicted RBP6.62□□□□□ -1.35
UBA3-204ENST00000461522 COL6A1P12109 1028 aa6.62□□□□□ -1.35
UBA3-204ENST00000461522 PAN2Q504Q3 1202 aaKnown RBP6.62□□□□□ -1.35
UBA3-204ENST00000461522 VASNQ6EMK4 673 aa6.62□□□□□ -1.35
UBA3-204ENST00000461522 MAMDC2Q7Z304 686 aaPredicted RBP6.62□□□□□ -1.35
UBA3-204ENST00000461522 HIRIP3Q9BW71 556 aaPredicted RBP6.62□□□□□ -1.35
UBA3-204ENST00000461522 TMEM168Q9H0V1 697 aa6.62□□□□□ -1.35
UBA3-204ENST00000461522 DLL4Q9NR61 685 aa6.62□□□□□ -1.35
UBA3-204ENST00000461522 PPP1R1BQ9UD71 204 aaPredicted RBP6.62□□□□□ -1.35
UBA3-204ENST00000461522 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
UBA3-204ENST00000461522 WNT9AO14904 365 aa6.61□□□□□ -1.35
UBA3-204ENST00000461522 CYP1A1P04798 512 aaPredicted RBP6.61□□□□□ -1.35
UBA3-204ENST00000461522 SUMO1P63165 101 aaKnown RBP6.61□□□□□ -1.35
UBA3-204ENST00000461522 FAM209AQ5JX71 171 aa6.61□□□□□ -1.35
UBA3-204ENST00000461522 PKN3Q6P5Z2 889 aa6.61□□□□□ -1.35
UBA3-204ENST00000461522 DBX2Q6ZNG2 339 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms