RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ARIH2O95376 493 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 CALML3P27482 149 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 SMARCA1P28370 1054 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 PTK7Q13308 1070 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 PTPROQ16827 1216 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 TCTN1Q2MV58 587 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 TRIM71Q2Q1W2 868 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 FBXO22Q8NEZ5 403 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 PABPC5Q96DU9 382 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 FBXL18Q96ME1 805 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 KATNAL1Q9BW62 490 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 EMSYQ7Z589 1322 aa15.82■□□□□ 0.12
SCAMP4-206ENST00000460767 ERICH2A1L162 156 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 KLRF2D3W0D1 207 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 OPLAHO14841 1288 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 F2P00734 622 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 GH1P01241 217 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 ZP2Q05996 745 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 ARHGAP1Q07960 439 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 NID2Q14112 1375 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 CDC37Q16543 378 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 NLRC5Q86WI3 1866 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 PPP1R13LQ8WUF5 828 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 MTUS1Q9ULD2 1270 aa15.81■□□□□ 0.12
SCAMP4-206ENST00000460767 HAS3O00219 553 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 HMGB1P09429 215 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 HOXD8P13378 290 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 CASTP20810 708 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 RCAN1P53805 252 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 EVCP57679 992 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 QRICH1Q2TAL8 776 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 ADHFE1Q8IWW8 467 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 AFG1LQ8WV93 481 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 C17orf80Q9BSJ5 609 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 SPZ1Q9BXG8 430 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 LRRC2Q9BYS8 371 aa15.8■□□□□ 0.12
SCAMP4-206ENST00000460767 ATG2AQ2TAZ0 1938 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 H3BNC9 293 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 LGR5O75473 907 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 AMHP03971 560 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 FUT2Q10981 343 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 MBTPS1Q14703 1052 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 DGKDQ16760 1214 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 APOA5Q6Q788 366 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 MYL10Q9BUA6 226 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 TM6SF1Q9BZW5 370 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 ZSWIM6Q9HCJ5 1215 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 HDAC6Q9UBN7 1215 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 BRPF3Q9ULD4 1205 aa15.79■□□□□ 0.12
SCAMP4-206ENST00000460767 ZBTB5O15062 677 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 NCK2O43639 380 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 EPC2Q52LR7 807 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 C7orf31Q8N865 590 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 BANK1Q8NDB2 785 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 TCEANC2Q96MN5 208 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 UIMC1Q96RL1 719 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 IWS1Q96ST2 819 aa15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 FAM217BQ9NTX9 383 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-206ENST00000460767 ABCB11O95342 1321 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 CPA1P15085 419 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 RPS6KB1P23443 525 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 PSEN2P49810 448 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 HERC4Q5GLZ8 1057 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 ZNF618Q5T7W0 954 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 SRBD1Q8N5C6 995 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 FANCBQ8NB91 859 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 PPTC7Q8NI37 304 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 POP1Q99575 1024 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 LZTS2Q9BRK4 669 aa15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 NSUN3Q9H649 340 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-206ENST00000460767 H3BQ06 376 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 CAND2O75155 1236 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 SEC24BO95487 1268 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 CALM1P0DP23 149 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 CALM2P0DP24 149 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 CALM3P0DP25 149 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 CTC1Q2NKJ3 1217 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 C8orf34Q49A92 452 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 PLEKHG4Q58EX7 1191 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 HFE2Q6ZVN8 426 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 TMTC3Q6ZXV5 915 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 BMP8AQ7Z5Y6 402 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 FBXO11Q86XK2 927 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 NSUN6Q8TEA1 469 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 WNT8BQ93098 351 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 MFSD14AQ96MC6 490 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 JAKMIP1Q96N16 626 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 PIGSQ96S52 555 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 DDX41Q9UJV9 622 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 SLC12A7Q9Y666 1083 aa15.76■□□□□ 0.11
SCAMP4-206ENST00000460767 PNMA6FA0A0J9YX94 578 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 CCDC69A6NI79 296 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 C5orf67F2Z3F1 127 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 RXRAP19793 462 aa15.75■□□□□ 0.11
SCAMP4-206ENST00000460767 HOXC8P31273 242 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms