RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 NFRKBQ6P4R8 1299 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 METTL7BQ6UX53 244 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 REXO1Q8N1G1 1221 aaKnown RBP17.07■□□□□ 0.32
ATG4B-213ENST00000460211 PPM1EQ8WY54 764 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
ATG4B-213ENST00000460211 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 ZNF576Q9H609 170 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 TPCN1Q9ULQ1 816 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 GRIN2DO15399 1336 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 SORBS3O60504 671 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 PFKFB2O60825 505 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 XBP1P17861 261 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 ZNF76P36508 570 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 CLK2P49760 499 aaKnown RBP17.06■□□□□ 0.32
ATG4B-213ENST00000460211 NLRP5P59047 1200 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 SCRN1Q12765 414 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 MTMR1Q13613 665 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 NBPF20Q3BBV1 942 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 FAM177A1Q8N128 213 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-213ENST00000460211 TIFAQ96CG3 184 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.326e-13■□□□□ 10.8
ATG4B-213ENST00000460211 JADE2Q9NQC1 790 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 UBIAD1Q9Y5Z9 338 aa17.06■□□□□ 0.32
ATG4B-213ENST00000460211 GRXCR1A8MXD5 290 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 TIMP1P01033 207 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 CD4P01730 458 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 ITGB5P18084 799 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 SREBF1P36956 1147 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 HSDL1Q3SXM5 330 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 CYFIP1Q7L576 1253 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 VPS54Q9P1Q0 977 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 TBX21Q9UL17 535 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 NOD1Q9Y239 953 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 KIAA1217Q5T5P2 1943 aa17.05■□□□□ 0.32
ATG4B-213ENST00000460211 B4GALT4O60513 344 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 PBX2P40425 430 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 SEMA3FQ13275 785 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 CEP55Q53EZ4 464 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 TJAP1Q5JTD0 557 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 WASF1Q92558 559 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 MXRA8Q9BRK3 442 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 TTC28Q96AY4 2481 aa17.04■□□□□ 0.32
ATG4B-213ENST00000460211 ACRP10323 421 aa17.03■□□□□ 0.32
ATG4B-213ENST00000460211 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-213ENST00000460211 PSEN2P49810 448 aa17.03■□□□□ 0.32
ATG4B-213ENST00000460211 MFSD5Q6N075 450 aa17.03■□□□□ 0.32
ATG4B-213ENST00000460211 TMEM199Q8N511 208 aa17.03■□□□□ 0.32
ATG4B-213ENST00000460211 C7orf31Q8N865 590 aa17.03■□□□□ 0.32
ATG4B-213ENST00000460211 PPP1R12CQ9BZL4 782 aa17.03■□□□□ 0.32
ATG4B-213ENST00000460211 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
ATG4B-213ENST00000460211 STK36Q9NRP7 1315 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 F2P00734 622 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 ZNF286BP0CG31 522 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 CSF2RAP15509 400 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 PPIGQ13427 754 aaKnown RBP eCLIP17.02■□□□□ 0.325e-8■■□□□ 13.2
ATG4B-213ENST00000460211 MFSD10Q14728 455 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 TMEM240Q5SV17 173 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 NIPA1Q7RTP0 329 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 SESTD1Q86VW0 696 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 KAT2BQ92831 832 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 GAS2L1Q99501 681 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-213ENST00000460211 SDF4Q9BRK5 362 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 ALG1Q9BT22 464 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 PBX4Q9BYU1 374 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 PRDM12Q9H4Q4 367 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 KCNH7Q9NS40 1196 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 TRMT13Q9NUP7 481 aaKnown RBP17.02■□□□□ 0.32
ATG4B-213ENST00000460211 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-213ENST00000460211 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.32
ATG4B-213ENST00000460211 CYP3A4P08684 503 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 KCNA2P16389 499 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 SP4Q02446 784 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 ME3Q16798 604 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 NECAB1Q8N987 351 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 IL27Q8NEV9 243 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 SEPT1Q8WYJ6 367 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 GTF3C6Q969F1 213 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 GPR20Q99678 358 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 PKD2L1Q9P0L9 805 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-213ENST00000460211 PCDHA4Q9UN74 947 aa17.01■□□□□ 0.31
ATG4B-213ENST00000460211 H3BRB1 525 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 HAS3O00219 553 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 TNFRSF10AO00220 468 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 MEIS1O00470 390 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 ATP9AO75110 1047 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 LGALS2P05162 132 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 RBM25P49756 843 aaKnown RBP17■□□□□ 0.31
ATG4B-213ENST00000460211 PTGISQ16647 500 aa17■□□□□ 0.31
ATG4B-213ENST00000460211 ZNF365Q70YC5 407 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms