RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
CMTM3-203ENST00000460097 GTF3C2Q8WUA4 911 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-203ENST00000460097 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
CMTM3-203ENST00000460097 IRX2Q9BZI1 471 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-203ENST00000460097 FAM217BQ9NTX9 383 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-203ENST00000460097 LIMA1Q9UHB6 759 aaKnown RBP17.55■□□□□ 0.4
CMTM3-203ENST00000460097 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
CMTM3-203ENST00000460097 JRKLQ9Y4A0 524 aa17.55■□□□□ 0.4
CMTM3-203ENST00000460097 ADGRA2Q96PE1 1338 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 A0A087WUV0 522 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-203ENST00000460097 BMP15O95972 392 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 DSG3P32926 999 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 ARHGAP25P42331 645 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 TOB1P50616 345 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-203ENST00000460097 GTF2A1P52655 376 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-203ENST00000460097 SP3Q02447 781 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 DNAJC21Q5F1R6 531 aaKnown RBP17.54■□□□□ 0.4
CMTM3-203ENST00000460097 SWT1Q5T5J6 900 aaKnown RBP17.54■□□□□ 0.4
CMTM3-203ENST00000460097 ANKRD13CQ8N6S4 541 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 AFAP1L1Q8TED9 768 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 ZNF296Q8WUU4 475 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-203ENST00000460097 AIFM3Q96NN9 605 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 FEM1BQ9UK73 627 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 SYNRGQ9UMZ2 1314 aa17.54■□□□□ 0.4
CMTM3-203ENST00000460097 FKTNO75072 461 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 PRR29P0C7W0 189 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 PDHBP11177 359 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 BCRP11274 1271 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-203ENST00000460097 LBX2Q6XYB7 198 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 TRAPPC11Q7Z392 1133 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 LY9Q9HBG7 655 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 FBXO28Q9NVF7 368 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 MYPNQ86TC9 1320 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 SPDYE16A6NNV3 312 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-203ENST00000460097 A6NNZ2 444 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 TEX33O43247 280 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 N4BP1O75113 896 aaKnown RBP17.53■□□□□ 0.4
CMTM3-203ENST00000460097 GYPCP04921 128 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 CCDC96Q2M329 555 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 TUBB8Q3ZCM7 444 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 KCTD1Q719H9 257 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
CMTM3-203ENST00000460097 CHURC1Q8WUH1 139 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 FAM204AQ9H8W3 233 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 SENP2Q9HC62 589 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 PPP1R9AQ9ULJ8 1098 aa17.53■□□□□ 0.4
CMTM3-203ENST00000460097 LRRIQ3A6PVS8 624 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-203ENST00000460097 SNHG28P0DPA3 235 aa17.52■□□□□ 0.4
CMTM3-203ENST00000460097 STAT2P52630 851 aa17.52■□□□□ 0.4
CMTM3-203ENST00000460097 CKAP4Q07065 602 aaKnown RBP17.52■□□□□ 0.4
CMTM3-203ENST00000460097 IKQ13123 557 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-203ENST00000460097 SLF1Q9BQI6 1058 aa17.52■□□□□ 0.4
CMTM3-203ENST00000460097 PYM1Q9BRP8 204 aaKnown RBP17.52■□□□□ 0.4
CMTM3-203ENST00000460097 RABGAP1Q9Y3P9 1069 aa17.52■□□□□ 0.4
CMTM3-203ENST00000460097 PLA2G6O60733 806 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 SYF2O95926 243 aaKnown RBP17.51■□□□□ 0.39
CMTM3-203ENST00000460097 ATP2B1P20020 1258 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 FAM110CQ1W6H9 321 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 CATIPQ7Z7H3 387 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 FAM160B2Q86V87 743 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 PACS2Q86VP3 889 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 TRMT44Q8IYL2 757 aaKnown RBP17.51■□□□□ 0.39
CMTM3-203ENST00000460097 EHBP1Q8NDI1 1231 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 GPRC5AQ8NFJ5 357 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 ATG4CQ96DT6 458 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 PAGR1Q9BTK6 254 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 HAUS4Q9H6D7 363 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 ZSWIM4Q9H7M6 989 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 TXNRD2Q9NNW7 524 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 ABHD10Q9NUJ1 306 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-203ENST00000460097 ATXN2Q99700 1313 aaKnown RBP17.51■□□□□ 0.39
CMTM3-203ENST00000460097 RNF40O75150 1001 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 ZNF543Q08ER8 600 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 PPP2R5BQ15173 497 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 PTPN21Q16825 1174 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
CMTM3-203ENST00000460097 PAPD7Q5XG87 772 aaKnown RBP17.51■□□□□ 0.39
CMTM3-203ENST00000460097 DIS3L2Q8IYB7 885 aaKnown RBP17.51■□□□□ 0.39
CMTM3-203ENST00000460097 TRIM22Q8IYM9 498 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 MB21D1Q8N884 522 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 COG1Q8WTW3 980 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 PHKBQ93100 1093 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 ADAMTS5Q9UNA0 930 aa17.51■□□□□ 0.39
CMTM3-203ENST00000460097 CCDC196A0A1B0GTZ2 297 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 VWA5AO00534 786 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 DEXIO95424 95 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 CASP14P31944 242 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 KIF22Q14807 665 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 Q3C1V9 767 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 GBP6Q6ZN66 633 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 TADA2BQ86TJ2 420 aa17.5■□□□□ 0.39
CMTM3-203ENST00000460097 FERMT2Q96AC1 680 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms