RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 GUF1Q8N442 669 aaKnown RBP18.22■□□□□ 0.51
CAPN13-203ENST00000458085 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
CAPN13-203ENST00000458085 SYTL5Q8TDW5 730 aaPredicted RBP18.22■□□□□ 0.51
CAPN13-203ENST00000458085 PURBQ96QR8 312 aaKnown RBP18.22■□□□□ 0.51
CAPN13-203ENST00000458085 SYT17Q9BSW7 474 aa18.22■□□□□ 0.51
CAPN13-203ENST00000458085 EHMT1Q9H9B1 1298 aa18.22■□□□□ 0.51
CAPN13-203ENST00000458085 KCND1Q9NSA2 647 aa18.22■□□□□ 0.51
CAPN13-203ENST00000458085 PCDHA2Q9Y5H9 948 aa18.22■□□□□ 0.51
CAPN13-203ENST00000458085 RNF225M0QZC1 329 aaPredicted RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 TNNT1P13805 278 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 EEF1GP26641 437 aaKnown RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 GHRHRQ02643 423 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 ANKRD20A12PQ8NF67 263 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 GTPBP4Q9BZE4 634 aaKnown RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 USP2O75604 605 aaPredicted RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 PPP1R2P41236 205 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 FXR1P51114 621 aaKnown RBP eCLIP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 RPS6P62753 249 aaKnown RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 UBXN1Q04323 297 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 PPP2R5CQ13362 524 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 FAM26FQ5R3K3 315 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 NYAP1Q6ZVC0 841 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 PPP1R13BQ96KQ4 1090 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 CNOT6LQ96LI5 555 aaKnown RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 TAAR1Q96RJ0 339 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 BAG1Q99933 345 aaPredicted RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 HSD17B14Q9BPX1 270 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 MXRA8Q9BRK3 442 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 ZNF577Q9BSK1 485 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 POLR3CQ9BUI4 534 aaPredicted RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 BCAS3Q9H6U6 928 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 POLD4Q9HCU8 107 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 BMP2KQ9NSY1 1161 aaPredicted RBP18.21■□□□□ 0.51
CAPN13-203ENST00000458085 DNM3Q9UQ16 869 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 PPP2R3BQ9Y5P8 575 aa18.21■□□□□ 0.51
CAPN13-203ENST00000458085 AKR1B15C9JRZ8 316 aaPredicted RBP18.2■□□□□ 0.5
CAPN13-203ENST00000458085 ZBTB39O15060 712 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 GAS7O60861 476 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 ZBED4O75132 1171 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 CASP14P31944 242 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 KCNJ6P48051 423 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 PSMD2Q13200 908 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 SYT2Q8N9I0 419 aaPredicted RBP18.2■□□□□ 0.5
CAPN13-203ENST00000458085 REPS2Q8NFH8 660 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
CAPN13-203ENST00000458085 ZNF507Q8TCN5 953 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 NOC3LQ8WTT2 800 aaKnown RBP18.2■□□□□ 0.5
CAPN13-203ENST00000458085 DYDC2Q96IM9 177 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 TRERF1Q96PN7 1200 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 UNC45AQ9H3U1 944 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 ITIH6Q6UXX5 1313 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 LGALS16A8MUM7 142 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 ADM5C9JUS6 153 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 NRDCO43847 1150 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 SLITRK3O94933 977 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 MRPS9P82933 396 aaKnown RBP18.2■□□□□ 0.5
CAPN13-203ENST00000458085 GIT2Q14161 759 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 PIGOQ8TEQ8 1089 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 TUBGCP2Q9BSJ2 902 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 BHMT2Q9H2M3 363 aa18.2■□□□□ 0.5
CAPN13-203ENST00000458085 WRAP73Q9P2S5 460 aaPredicted RBP18.2■□□□□ 0.5
CAPN13-203ENST00000458085 MAGEC2Q9UBF1 373 aaPredicted RBP18.2■□□□□ 0.5
CAPN13-203ENST00000458085 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 B4DLN1 442 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 HERC4Q5GLZ8 1057 aaPredicted RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 B3GNT9Q6UX72 402 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 PPFIBP1Q86W92 1011 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 CCDC65Q8IXS2 484 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 CTDP1Q9Y5B0 961 aaPredicted RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 DDX39AO00148 427 aaKnown RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 IPO5O00410 1097 aaKnown RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 MFAP3LO75121 409 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 PRKCSHP14314 528 aaPredicted RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 EIF2AK2P19525 551 aaKnown RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 SETQ01105 290 aaPredicted RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 SUPT20HL1Q3ZLR7 823 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 NOL9Q5SY16 702 aaKnown RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 TPH2Q8IWU9 490 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 MYOCDQ8IZQ8 938 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 MB21D1Q8N884 522 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 REEP2Q9BRK0 252 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 RUSC1Q9BVN2 902 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 ZHX3Q9H4I2 956 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 ADARB2Q9NS39 739 aaKnown RBP18.19■□□□□ 0.5
CAPN13-203ENST00000458085 AFG3L2Q9Y4W6 797 aa18.19■□□□□ 0.5
CAPN13-203ENST00000458085 RSPH10B2B2RC85 870 aa18.18■□□□□ 0.5
CAPN13-203ENST00000458085 KRT18P05783 430 aaKnown RBP18.18■□□□□ 0.5
CAPN13-203ENST00000458085 RSPH10BP0C881 870 aa18.18■□□□□ 0.5
CAPN13-203ENST00000458085 DSG3P32926 999 aa18.18■□□□□ 0.5
CAPN13-203ENST00000458085 MTF1Q14872 753 aa18.18■□□□□ 0.5
CAPN13-203ENST00000458085 NSMFQ6X4W1 530 aa18.18■□□□□ 0.5
CAPN13-203ENST00000458085 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
CAPN13-203ENST00000458085 KCNH7Q9NS40 1196 aa18.18■□□□□ 0.5
CAPN13-203ENST00000458085 C19orf81C9J6K1 198 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms