RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ATRIPQ8WXE1 791 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 GATAD2BQ8WXI9 593 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 MYLIPQ8WY64 445 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 JARID2Q92833 1246 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 RPGRQ92834 1020 aaKnown RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 ZNF669Q96BR6 464 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 MTMR8Q96EF0 704 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 TMEM74Q96NL1 305 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 DIRC2Q96SL1 478 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 SP110Q9HB58 689 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 CD320Q9NPF0 282 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 SH3GLB2Q9NR46 395 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 DUSP13Q9UII6 198 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 KCNH3Q9ULD8 1083 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 PHTF1Q9UMS5 762 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 LUC7L2Q9Y383 392 aaKnown RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 CORINQ9Y5Q5 1042 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 ABHD14A-ACY1A0A1B0GW23 586 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 RBAK-RBAKDNI3L0D1 243 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 K7ENM7 598 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 NFIBO00712 420 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 GJB6O95452 261 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 ZGLP1P0C6A0 271 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 FAM153BP0C7A2 387 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 C1QTNF9P0C862 333 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 GLDCP23378 1020 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 GIPRP48546 466 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 EIF6P56537 245 aaKnown RBP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 GJA9P57773 515 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 GBX1Q14549 363 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 KIF22Q14807 665 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 PPP2R5EQ16537 467 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 LONRF2Q1L5Z9 754 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 MINDY4Q4G0A6 757 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 BNC2Q6ZN30 1099 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 C1orf122Q6ZSJ8 110 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 LCNL1Q6ZST4 164 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 LHFPL2Q6ZUX7 228 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 RSRC2Q7L4I2 434 aaKnown RBP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 TPH2Q8IWU9 490 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 LILRA2Q8N149 483 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 ST13P5Q8NFI4 369 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 WDR66Q8TBY9 1149 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 TRIM44Q96DX7 344 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 ASPNQ9BXN1 380 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 TRIM8Q9BZR9 551 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 PUS7LQ9H0K6 701 aaKnown RBP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 OSBPL5Q9H0X9 879 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 NLRC4Q9NPP4 1024 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 KLHL11Q9NVR0 708 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 IP6K2Q9UHH9 426 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 TMCC3Q9ULS5 477 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 TNKSO95271 1327 aa4.68□□□□□ -1.66
HMGB3P30-201ENST00000457863 A0A087WZG4 1122 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 WASH4PA8MWX3 477 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 J3KRW8 73 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 GABRDO14764 452 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 F13A1P00488 732 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 SETSIPP0DME0 302 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 GARTP22102 1010 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 PIK3CAP42336 1068 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 HK2P52789 917 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 ERVFC1P60507 584 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 EGR3Q06889 387 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 CAMK2GQ13555 558 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 SLC9A5Q14940 896 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 NR0B2Q15466 257 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 CYB5RLQ6IPT4 315 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 CCDC81Q6ZN84 652 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 EGFL6Q8IUX8 553 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 SLITRK4Q8IW52 837 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 YTHDC1Q96MU7 727 aaKnown RBP4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 SLC26A8Q96RN1 970 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 TARS2Q9BW92 718 aaKnown RBP4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 PDGFDQ9GZP0 370 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 ADAMTS10Q9H324 1103 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 KIAA1586Q9HCI6 787 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 DCP1AQ9NPI6 582 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 DDX21Q9NR30 783 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 MAN1C1Q9NR34 630 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 RASSF1Q9NS23 344 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 UBP1Q9NZI7 540 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 REV1Q9UBZ9 1251 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 RAPGEFL1Q9UHV5 662 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 TTLL3Q9Y4R7 772 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 SUPT16HQ9Y5B9 1047 aaKnown RBP4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 PCDHGB3Q9Y5G1 929 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 ITIH6Q6UXX5 1313 aa4.67□□□□□ -1.66
HMGB3P30-201ENST00000457863 GTPBP10A4D1E9 387 aaKnown RBP4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 FITM1A5D6W6 292 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 GOLGA6L6A8MZA4 724 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 F6X3S4 739 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 GPR39O43194 453 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 CNOT4O95628 575 aaKnown RBP4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 PF4P02776 101 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 LTKP29376 864 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 ECE1P42892 770 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 ROR1Q01973 937 aa4.66□□□□□ -1.66
HMGB3P30-201ENST00000457863 MPP2Q14168 576 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms