RNA–Protein interactions for RNA: ENST00000457080.5

MITF-211, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best)

Gene MITF, Length 382 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-211	ENST00000457080	RAB11FIP4	Q86YS3	637 aa		13.55	□□□□□ -0.24
MITF-211	ENST00000457080	CMTR1	Q8N1G2	835 aa	Known RBP	13.55	□□□□□ -0.24
MITF-211	ENST00000457080	CCDC82	Q8N4S0	544 aa		13.55	□□□□□ -0.24
MITF-211	ENST00000457080	SYMPK	Q92797	1274 aa	Known RBP	13.55	□□□□□ -0.24
MITF-211	ENST00000457080	GPRASP2	Q96D09	838 aa		13.55	□□□□□ -0.24
MITF-211	ENST00000457080	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.55	□□□□□ -0.24
MITF-211	ENST00000457080	PRUNE2	Q8WUY3	3088 aa		13.55	□□□□□ -0.24
MITF-211	ENST00000457080	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	hCG_1984214	I3L0E3	225 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	ZBTB43	O43298	467 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	TLL1	O43897	1013 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	CAND2	O75155	1236 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	SMIM10L2A	P0DMW4	78 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	SMIM10L2B	P0DMW5	78 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	MYOG	P15173	224 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	WDR5	P61964	334 aa	Known RBP	13.54	□□□□□ -0.24
MITF-211	ENST00000457080	IKBKE	Q14164	716 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	RTN1	Q16799	776 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	TRIM71	Q2Q1W2	868 aa	Known RBP	13.54	□□□□□ -0.24
MITF-211	ENST00000457080	PPP1R18	Q6NYC8	613 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	DHX32	Q7L7V1	743 aa	Known RBP	13.54	□□□□□ -0.24
MITF-211	ENST00000457080	SERINC5	Q86VE9	423 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	ZNF713	Q8N859	430 aa	Predicted RBP	13.54	□□□□□ -0.24
MITF-211	ENST00000457080	USP38	Q8NB14	1042 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	PPM1E	Q8WY54	764 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	ATP6V0A1	Q93050	837 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	GPR20	Q99678	358 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	ZBED2	Q9BTP6	218 aa		13.54	□□□□□ -0.24
MITF-211	ENST00000457080	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.54	□□□□□ -0.24
MITF-211	ENST00000457080	TRIP12	Q14669	1992 aa	Predicted RBP	13.53	□□□□□ -0.24
MITF-211	ENST00000457080	GTPBP6	O43824	516 aa	Predicted RBP	13.53	□□□□□ -0.24
MITF-211	ENST00000457080	NBN	O60934	754 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	THPO	P40225	353 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	RCAN1	P53805	252 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	FGD1	P98174	961 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	SP4	Q02446	784 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	SEMA3F	Q13275	785 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	MTMR1	Q13613	665 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	ADGRE1	Q14246	886 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	TSGA10IP	Q3SY00	556 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	ZNF618	Q5T7W0	954 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	THEG	Q9P2T0	379 aa		13.53	□□□□□ -0.24
MITF-211	ENST00000457080	hCG_1642624	A0A1W2PR95	340 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	GOLGA8A	A7E2F4	631 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	GOLGA8B	A8MQT2	603 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	RSPH10B2	B2RC85	870 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	MAFG	O15525	162 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	LGR5	O75473	907 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	RSPH10B	P0C881	870 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	HOXC8	P31273	242 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	NAPA	P54920	295 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	ZNF200	P98182	395 aa	Predicted RBP	13.52	□□□□□ -0.25
MITF-211	ENST00000457080	COL9A3	Q14050	684 aa	Predicted RBP	13.52	□□□□□ -0.25
MITF-211	ENST00000457080	UBE2S	Q16763	222 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	UTP14C	Q5TAP6	766 aa	Known RBP	13.52	□□□□□ -0.25
MITF-211	ENST00000457080	SKAP1	Q86WV1	359 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.52	□□□□□ -0.25
MITF-211	ENST00000457080	CCDC136	Q96JN2	1154 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	GLT8D2	Q9H1C3	349 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	CNTNAP5	Q8WYK1	1306 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	CHD7	Q9P2D1	2997 aa		13.52	□□□□□ -0.25
MITF-211	ENST00000457080	KLF18	A0A0U1RQI7	1052 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	CCDC196	A0A1B0GTZ2	297 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	TCF7	P36402	384 aa	Predicted RBP	13.51	□□□□□ -0.25
MITF-211	ENST00000457080	ADCY7	P51828	1080 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	EXOSC10	Q01780	885 aa	Known RBP	13.51	□□□□□ -0.25
MITF-211	ENST00000457080	TAP1	Q03518	808 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	GPNMB	Q14956	572 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	TJAP1	Q5JTD0	557 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	WWC2	Q6AWC2	1192 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	TRAF7	Q6Q0C0	670 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	TRIM50	Q86XT4	487 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	WNT8B	Q93098	351 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	RNPEP	Q9H4A4	650 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	BCAS3	Q9H6U6	928 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	RIC8A	Q9NPQ8	531 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.51	□□□□□ -0.25
MITF-211	ENST00000457080	PCDHA6	Q9UN73	950 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	PCDHA8	Q9Y5H6	950 aa		13.51	□□□□□ -0.25
MITF-211	ENST00000457080	NRCAM	Q92823	1304 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	TREH	O43280	583 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	GJB5	O95377	273 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	FOS	P01100	380 aa	Predicted RBP	13.5	□□□□□ -0.25
MITF-211	ENST00000457080	AMH	P03971	560 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	KCNA2	P16389	499 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	ITGB5	P18084	799 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	ARHGAP4	P98171	946 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	HIC1	Q14526	733 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	CCDC85B	Q15834	202 aa	Predicted RBP	13.5	□□□□□ -0.25
MITF-211	ENST00000457080	ADCK5	Q3MIX3	580 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	RASEF	Q8IZ41	740 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	MICALL1	Q8N3F8	863 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	IL27	Q8NEV9	243 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	TET1	Q8NFU7	2136 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	ARNTL2	Q8WYA1	636 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	SEPT1	Q8WYJ6	367 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	SEPT8	Q92599	483 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	TCEANC2	Q96MN5	208 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	RAD9A	Q99638	391 aa		13.5	□□□□□ -0.25
MITF-211	ENST00000457080	JADE2	Q9NQC1	790 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms