RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 SLC5A5Q92911 643 aa15.96■□□□□ 0.15
LINC00887-204ENST00000456816 CHAMP1Q96JM3 812 aa15.96■□□□□ 0.15
LINC00887-204ENST00000456816 SPATA32Q96LK8 384 aa15.96■□□□□ 0.15
LINC00887-204ENST00000456816 AP5M1Q9H0R1 490 aa15.96■□□□□ 0.15
LINC00887-204ENST00000456816 KCNMB3Q9NPA1 279 aa15.96■□□□□ 0.15
LINC00887-204ENST00000456816 TBC1D22BQ9NU19 505 aa15.96■□□□□ 0.15
LINC00887-204ENST00000456816 DDX41Q9UJV9 622 aaKnown RBP15.96■□□□□ 0.15
LINC00887-204ENST00000456816 MCM3APO60318 1980 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 NOP56O00567 594 aaKnown RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 SPTLC2O15270 562 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 ATP9AO75110 1047 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 RARBP10826 455 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 KCNA2P16389 499 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 SP2Q02086 613 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 ITGB3BPQ13352 177 aaPredicted RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 GJC2Q5T442 439 aaPredicted RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 MAP3K21Q5TCX8 1036 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 CCDC62Q6P9F0 684 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 DTHD1Q6ZMT9 781 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 TLK2Q86UE8 772 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 KCNG4Q8TDN1 519 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 HAS1Q92839 578 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 COPS5Q92905 334 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 LENG1Q96BZ8 264 aaPredicted RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 RIT2Q99578 217 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 SENP7Q9BQF6 1050 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 RAB34Q9BZG1 259 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 SCAND2PQ9GZW5 306 aaPredicted RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 TTC12Q9H892 705 aaPredicted RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 SPC25Q9HBM1 224 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 JPH1Q9HDC5 661 aaPredicted RBP15.95■□□□□ 0.14
LINC00887-204ENST00000456816 PCDHA12Q9UN75 941 aa15.95■□□□□ 0.14
LINC00887-204ENST00000456816 NFASCO94856 1347 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 VWA3AA6NCI4 1184 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 DYNC1LI2O43237 492 aaPredicted RBP15.94■□□□□ 0.14
LINC00887-204ENST00000456816 PRPHP41219 470 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 ME1P48163 572 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 KRT76Q01546 638 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 CELF3Q5SZQ8 465 aaKnown RBP15.94■□□□□ 0.14
LINC00887-204ENST00000456816 NCAPH2Q6IBW4 605 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 C4orf32Q8N8J7 132 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 LINC00301Q8NCQ3 95 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 SPATA33Q96N06 139 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 MTMR9Q96QG7 549 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.94■□□□□ 0.14
LINC00887-204ENST00000456816 UNC93B1Q9H1C4 597 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 SLC9A2Q9UBY0 812 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 DDX20Q9UHI6 824 aaKnown RBP15.94■□□□□ 0.14
LINC00887-204ENST00000456816 SAMM50Q9Y512 469 aa15.94■□□□□ 0.14
LINC00887-204ENST00000456816 MSCO60682 206 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 CCL5P13501 91 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 PTGS1P23219 599 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 TECP42680 631 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 LAMC2Q13753 1193 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 PTPAQ15257 358 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 CSPP1Q1MSJ5 1256 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 TPRNQ4KMQ1 711 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 BRDTQ58F21 947 aaPredicted RBP15.93■□□□□ 0.14
LINC00887-204ENST00000456816 TMEM63BQ5T3F8 832 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 ARL6IP4Q66PJ3 421 aaKnown RBP15.93■□□□□ 0.14
LINC00887-204ENST00000456816 METTL7BQ6UX53 244 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 MIER3Q7Z3K6 550 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 KRI1Q8N9T8 703 aaKnown RBP15.93■□□□□ 0.14
LINC00887-204ENST00000456816 LEO1Q8WVC0 666 aaPredicted RBP15.93■□□□□ 0.14
LINC00887-204ENST00000456816 FERMT2Q96AC1 680 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 GBP4Q96PP9 640 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 MCOLN1Q9GZU1 580 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 RNF208Q9H0X6 261 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 GDPD2Q9HCC8 539 aa15.93■□□□□ 0.14
LINC00887-204ENST00000456816 ADCY6O43306 1168 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 DUSP11O75319 330 aaKnown RBP15.92■□□□□ 0.14
LINC00887-204ENST00000456816 PSMD10O75832 226 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 FARP2O94887 1054 aaPredicted RBP15.92■□□□□ 0.14
LINC00887-204ENST00000456816 C6orf222P0C671 652 aaPredicted RBP15.92■□□□□ 0.14
LINC00887-204ENST00000456816 ARHGAP1Q07960 439 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 MTFR1Q15390 333 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 UNC45AQ9H3U1 944 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 BCAS3Q9H6U6 928 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 XPNPEP3Q9NQH7 507 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 ELP1O95163 1332 aa15.92■□□□□ 0.14
LINC00887-204ENST00000456816 GOLGA6L4A6NEF3 574 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 POTEMA6NI47 508 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 WDR64B1ANS9 1081 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 DHX15O43143 795 aaKnown RBP15.91■□□□□ 0.14
LINC00887-204ENST00000456816 KCNA4P22459 653 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 JAK3P52333 1124 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 ACTR2P61160 394 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 ZNF746Q6NUN9 644 aaPredicted RBP15.91■□□□□ 0.14
LINC00887-204ENST00000456816 TNS4Q8IZW8 715 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 ERMNQ8TAM6 284 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 AFG1LQ8WV93 481 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 ARMC5Q96C12 935 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 ZNF333Q96JL9 665 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 LRWD1Q9UFC0 647 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 RCOR1Q9UKL0 485 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 VAV3Q9UKW4 847 aa15.91■□□□□ 0.14
LINC00887-204ENST00000456816 GNEQ9Y223 722 aaKnown RBP15.91■□□□□ 0.14
LINC00887-204ENST00000456816 Q9Y3F1 56 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms