RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 EDEM3Q9BZQ6 932 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 HDAC6Q9UBN7 1215 aa20.37■□□□□ 0.85
SEMA3B-209ENST00000456560 ENC1O14682 589 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 MED24O75448 989 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 GDF11O95390 407 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 LCA5LO95447 670 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 NDUFB10O96000 172 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 SSBP05455 408 aaKnown RBP eCLIP20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 PLEKP08567 350 aaPredicted RBP20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 CYP11B2P19099 503 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 OAS2P29728 719 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 HNRNPH2P55795 449 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 CYP27A1Q02318 531 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 Q4G0T1 1027 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 GPBP1Q86WP2 473 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 CCDC42Q96M95 316 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 MMRN2Q9H8L6 949 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 COL4A3BPQ9Y5P4 624 aa20.36■□□□□ 0.85
SEMA3B-209ENST00000456560 FRMD3A2A2Y4 597 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 TBX3O15119 743 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 ENTPD3O75355 529 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 STAT3P40763 770 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 SNAP25P60880 206 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 KCNMA1Q12791 1236 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 BEND6Q5SZJ8 279 aaPredicted RBP20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 NOA1Q8NC60 698 aaKnown RBP20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 CEP63Q96MT8 703 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 SAR1BQ9Y6B6 198 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 NPHP3-ACAD11A0A0J9YXS1 232 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 MAP2K7O14733 419 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 SMC1AQ14683 1233 aaKnown RBP20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 ARSHQ5FYA8 562 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 BTNL9Q6UXG8 535 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 FBXO11Q86XK2 927 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 C7orf43Q8WVR3 580 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 LENG9Q96B70 501 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 TDRD3Q9H7E2 651 aaKnown RBP20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 DUSP10Q9Y6W6 482 aa20.35■□□□□ 0.85
SEMA3B-209ENST00000456560 TRAF5O00463 557 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 SLC12A3P55017 1021 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 IRX5P78411 483 aaPredicted RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 ZC3H3Q8IXZ2 948 aaKnown RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 TSGA10Q9BZW7 698 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 TBC1D7Q9P0N9 293 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 SRCAPQ6ZRS2 3230 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 COL2A1P02458 1487 aaPredicted RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 ANO9A1A5B4 782 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 FOSP01100 380 aaPredicted RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 MARSP56192 900 aaKnown RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 KIF5AQ12840 1032 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 RRP1BQ14684 758 aaKnown RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 SPA17Q15506 151 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 ARHGAP27Q6ZUM4 889 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 KRT26Q7Z3Y9 468 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 NEK11Q8NG66 645 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 KCTD10Q9H3F6 313 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 ZCCHC17Q9NP64 241 aaKnown RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 PITPNM2Q9BZ72 1349 aa20.34■□□□□ 0.85
SEMA3B-209ENST00000456560 LRRC53A6NM62 1247 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 RHOXF2BP0C7M4 288 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 SREBF1P36956 1147 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 EIF4A3P38919 411 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 PRR16Q569H4 304 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 PDXDC1Q6P996 788 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 RRAGAQ7L523 313 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 CATSPER3Q86XQ3 398 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 TXLNBQ8N3L3 684 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 SCFD1Q8WVM8 642 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 RHOXF2Q9BQY4 288 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 PCDHA13Q9Y5I0 950 aa20.33■□□□□ 0.85
SEMA3B-209ENST00000456560 TUBBP07437 444 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 BMP3P12645 472 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 CHRNA5P30532 468 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 CIITAP33076 1130 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 KIF11P52732 1056 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 AOC3Q16853 763 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 HERC4Q5GLZ8 1057 aaPredicted RBP20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 HAUS3Q68CZ6 603 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 CCDC155Q8N6L0 562 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 MMS19Q96T76 1030 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 TMEM51Q9NW97 253 aa20.33■□□□□ 0.84
SEMA3B-209ENST00000456560 POTEFA5A3E0 1075 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 OPLAHO14841 1288 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 GNA14O95837 355 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 GH2P01242 217 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 POTEIP0CG38 1075 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 SPATA31C1P0DKV0 1188 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 ASTE1Q2TB18 679 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 RBM26Q5T8P6 1007 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 POTEGQ6S5H5 508 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 POTEEQ6S8J3 1075 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 SECISBP2LQ93073 1101 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 CNKSR1Q969H4 720 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 PRMT6Q96LA8 375 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 ABCB6Q9NP58 842 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 EMILIN3Q9NT22 766 aa20.32■□□□□ 0.84
SEMA3B-209ENST00000456560 FAM86B1E9PN63 330 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms