RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 USP17L6PQ6QN14 398 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 ZFPM1Q8IX07 1006 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 MBOAT7Q96N66 472 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 IDI2Q9BXS1 227 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 DBNDD1Q9H9R9 158 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 KIAA1024Q9UPX6 916 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 PCDHA13Q9Y5I0 950 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 KIF13BQ9NQT8 1826 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 CCDC66A2RUB6 948 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 TRAF5O00463 557 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 ZNF263O14978 683 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 PLEKP08567 350 aaPredicted RBP22.22■■□□□ 1.15
CSPG5-203ENST00000456150 RRAGAQ7L523 313 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 CACNA2D4Q7Z3S7 1137 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 GLIS3Q8NEA6 775 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 GJA10Q969M2 543 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 MMS19Q96T76 1030 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 NUCKS1Q9H1E3 243 aaKnown RBP22.22■■□□□ 1.15
CSPG5-203ENST00000456150 SH2D4AQ9H788 454 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 KCNQ5Q9NR82 932 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 LRRC53A6NM62 1247 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 AKR1B10O60218 316 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 EIF4A3P38919 411 aaKnown RBP22.21■■□□□ 1.15
CSPG5-203ENST00000456150 HAUS3Q68CZ6 603 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 PDXDC1Q6P996 788 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 TTLL6Q8N841 843 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 CAGE1Q8TC20 777 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 BAP1Q92560 729 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 JRKLQ9Y4A0 524 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 TARSL2A2RTX5 802 aaKnown RBP22.21■■□□□ 1.15
CSPG5-203ENST00000456150 E9PMD0 336 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 NPM3O75607 178 aaKnown RBP22.21■■□□□ 1.15
CSPG5-203ENST00000456150 TCP10Q12799 353 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 STRIP1Q5VSL9 837 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 GPBP1Q86WP2 473 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 ACBD3Q9H3P7 528 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.21■■□□□ 1.15
CSPG5-203ENST00000456150 DUSP10Q9Y6W6 482 aa22.21■■□□□ 1.15
CSPG5-203ENST00000456150 PITPNM2Q9BZ72 1349 aa22.2■■□□□ 1.14
CSPG5-203ENST00000456150 SRGAP2O75044 1071 aa22.2■■□□□ 1.14
CSPG5-203ENST00000456150 MAP9Q49MG5 647 aa22.2■■□□□ 1.14
CSPG5-203ENST00000456150 TMEM179Q6ZVK1 233 aa22.2■■□□□ 1.14
CSPG5-203ENST00000456150 KRT26Q7Z3Y9 468 aa22.2■■□□□ 1.14
CSPG5-203ENST00000456150 JADE2Q9NQC1 790 aa22.2■■□□□ 1.14
CSPG5-203ENST00000456150 SSU72P8A0A1W2PR75 194 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 POTEB3A0JP26 581 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 DDTLA6NHG4 134 aaPredicted RBP22.19■■□□□ 1.14
CSPG5-203ENST00000456150 POTECB2RU33 542 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 POLD1P28340 1107 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 MARSP56192 900 aaKnown RBP22.19■■□□□ 1.14
CSPG5-203ENST00000456150 ICA1Q05084 483 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 TAF3Q5VWG9 929 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 POTEBQ6S5H4 581 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 KIAA0825Q8IV33 1275 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 CAPZA3Q96KX2 299 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 ALS2CR12Q96Q35 445 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 AMNQ9BXJ7 453 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 CEP72Q9P209 647 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 STK24Q9Y6E0 443 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 ATAD5Q96QE3 1844 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 TBX3O15119 743 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 RBM5P52756 815 aaKnown RBP eCLIP22.19■■□□□ 1.14
CSPG5-203ENST00000456150 MAPK8IP2Q13387 824 aaPredicted RBP22.19■■□□□ 1.14
CSPG5-203ENST00000456150 AOC3Q16853 763 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 HERC4Q5GLZ8 1057 aaPredicted RBP22.19■■□□□ 1.14
CSPG5-203ENST00000456150 TATDN1Q6P1N9 297 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 PPP4R3CPQ6ZMV5 832 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 ERMNQ8TAM6 284 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 FAM198AQ9UFP1 575 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 PCDHA2Q9Y5H9 948 aa22.19■■□□□ 1.14
CSPG5-203ENST00000456150 MEIS2O14770 477 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 KRT18P05783 430 aaKnown RBP22.18■■□□□ 1.14
CSPG5-203ENST00000456150 SLURP2P0DP57 97 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 CYP11B2P19099 503 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 ARHGAP4P98171 946 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 CASP8Q14790 479 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 GMCL1P1Q8NEA9 526 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 SYN2Q92777 582 aaPredicted RBP22.18■■□□□ 1.14
CSPG5-203ENST00000456150 PDE11AQ9HCR9 933 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 ZCCHC17Q9NP64 241 aaKnown RBP22.18■■□□□ 1.14
CSPG5-203ENST00000456150 PPP1R1BQ9UD71 204 aaPredicted RBP22.18■■□□□ 1.14
CSPG5-203ENST00000456150 FAM184BQ9ULE4 1060 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 FRMD3A2A2Y4 597 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 FAM196BA6NMK8 535 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 H3BQF6 201 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 FOSP01100 380 aaPredicted RBP22.18■■□□□ 1.14
CSPG5-203ENST00000456150 PRLRP16471 622 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 CACNB3P54284 484 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 KCNMA1Q12791 1236 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 CRYGNQ8WXF5 182 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 TBC1D7Q9P0N9 293 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 SNX12Q9UMY4 172 aa22.18■■□□□ 1.14
CSPG5-203ENST00000456150 PJA2O43164 708 aa22.17■■□□□ 1.14
CSPG5-203ENST00000456150 MAGEA1P43355 309 aa22.17■■□□□ 1.14
CSPG5-203ENST00000456150 Q4G0T1 1027 aa22.17■■□□□ 1.14
CSPG5-203ENST00000456150 CCDC70Q6NSX1 233 aa22.17■■□□□ 1.14
CSPG5-203ENST00000456150 ETNPPLQ8TBG4 499 aa22.17■■□□□ 1.14
CSPG5-203ENST00000456150 GMCL1Q96IK5 515 aa22.17■■□□□ 1.14
CSPG5-203ENST00000456150 SGIP1Q9BQI5 828 aa22.17■■□□□ 1.14
CSPG5-203ENST00000456150 EMILIN3Q9NT22 766 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms