RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 CCDC85CA6NKD9 419 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 PABPC1P11940 636 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 SF3A1Q15459 793 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 CHRNA2Q15822 529 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 RGL3Q3MIN7 710 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 MTERF2Q49AM1 385 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 MILR1Q7Z6M3 343 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 SMARCC2Q8TAQ2 1214 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 DCAF4Q8WV16 495 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 OSBP2Q969R2 916 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 SPATA9Q9BWV2 254 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 ST6GALNAC2Q9UJ37 374 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 FBXL7Q9UJT9 491 aa5.67□□□□□ -1.5
R3HDM1-212ENST00000456040 HGSO14964 777 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 DGKIO75912 1065 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 RBL2Q08999 1139 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 IFRD2Q12894 506 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 SOGA3Q5TF21 947 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 SPATC1Q76KD6 591 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 DPH6Q7L8W6 267 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 PHF20Q9BVI0 1012 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 EPB41L1Q9H4G0 881 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 INVSQ9Y283 1065 aa5.66□□□□□ -1.5
R3HDM1-212ENST00000456040 CYP2C8P10632 490 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 SSRP1Q08945 709 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 STEAP3Q658P3 488 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 LRP10Q7Z4F1 713 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 ZC3H18Q86VM9 953 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 MIB1Q86YT6 1006 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 IPO9Q96P70 1041 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 ZFYVE21Q9BQ24 234 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 YIPF4Q9BSR8 244 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 DEF6Q9H4E7 631 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 NGRNQ9NPE2 291 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 ZNF652Q9Y2D9 606 aa5.65□□□□□ -1.5
R3HDM1-212ENST00000456040 MROH6A6NGR9 719 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 MAFKO60675 156 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 EMC4Q5J8M3 183 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 YOD1Q5VVQ6 348 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 CD300LDQ6UXZ3 194 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 SCUBE1Q8IWY4 988 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 FAM126BQ8IXS8 530 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 Q8N1X5 172 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 CDC6Q99741 560 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 ZNF747Q9BV97 191 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 SPATA6Q9NWH7 488 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 PFDN2Q9UHV9 154 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 HS3ST3A1Q9Y663 406 aa5.64□□□□□ -1.51
R3HDM1-212ENST00000456040 KRIT1O00522 736 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 ADCY3O60266 1144 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 MSCO60682 206 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 AMHP03971 560 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 C8BP07358 591 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 GPR85P60893 370 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 SERINC3Q13530 473 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 NTRK3Q16288 839 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 KIZQ2M2Z5 673 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 STYK1Q6J9G0 422 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 KCNT2Q6UVM3 1135 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 LBX2Q6XYB7 198 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 LIMS2Q7Z4I7 341 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 PLEKHH3Q7Z736 793 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 IFNL3Q8IZI9 196 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 ZBTB38Q8NAP3 1195 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 NOX5Q96PH1 765 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 PCED1AQ9H1Q7 454 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 CDIP1Q9H305 208 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 PCDHB4Q9Y5E5 795 aa5.63□□□□□ -1.51
R3HDM1-212ENST00000456040 NPEPPSL1A6NEC2 478 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 TADA3O75528 432 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 TGFB2P61812 414 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 NKX3-2P78367 333 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 SMAD4Q13485 552 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 RASA3Q14644 834 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 LINC00482Q8N8I6 264 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 PHOSPHO1Q8TCT1 267 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 DEPDC7Q96QD5 511 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 JAM3Q9BX67 310 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 KLC2Q9H0B6 622 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 SMOC1Q9H4F8 434 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 SLC6A20Q9NP91 592 aa5.62□□□□□ -1.51
R3HDM1-212ENST00000456040 TRBV23-1A0A0A0MS06 115 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 TCRBV5S2A0A599 114 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 BLACEA4D250 179 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 LAMTOR5O43504 91 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 DIAPH1O60610 1272 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 GRK2P25098 689 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 RPL13P26373 211 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 GRK3P35626 688 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 STAT5AP42229 794 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 SUMO1P63165 101 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 SPIRE1Q08AE8 756 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 LONRF2Q1L5Z9 754 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 CYP4F22Q6NT55 531 aa5.61□□□□□ -1.51
R3HDM1-212ENST00000456040 TRIM48Q8IWZ4 208 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms