RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 HOXD8P13378 290 aaPredicted RBP8.04□□□□□ -1.12
COMMD1-205ENST00000455659 FDPSP14324 419 aaKnown RBP8.04□□□□□ -1.12
COMMD1-205ENST00000455659 SYN1P17600 705 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 KRT2P35908 639 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 CHMP4BP1P59074 171 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 SP2Q02086 613 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 TLE2Q04725 743 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 ITGA7Q13683 1181 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 NONOQ15233 471 aaKnown RBP eCLIP8.04□□□□□ -1.12
COMMD1-205ENST00000455659 HSDL1Q3SXM5 330 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 FAM47CQ5HY64 1035 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 CYFIP1Q7L576 1253 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 KRT25Q7Z3Z0 450 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 TRIM50Q86XT4 487 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 FAM126BQ8IXS8 530 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 FAM184AQ8NB25 1140 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 GIMAP8Q8ND71 665 aaPredicted RBP8.04□□□□□ -1.12
COMMD1-205ENST00000455659 IL27Q8NEV9 243 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 CRYGNQ8WXF5 182 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 TMX3Q96JJ7 454 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 SENP7Q9BQF6 1050 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 MXRA8Q9BRK3 442 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 SDF4Q9BRK5 362 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 LLPHQ9BRT6 129 aaKnown RBP8.04□□□□□ -1.12
COMMD1-205ENST00000455659 KCNH7Q9NS40 1196 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 PCDH10Q9P2E7 1040 aa8.04□□□□□ -1.12
COMMD1-205ENST00000455659 SIP14410 1827 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 SZT2Q5T011 3432 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 IGLV3-22A0A075B6J6 115 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 M0R2N6 131 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 DDX39AO00148 427 aaKnown RBP8.03□□□□□ -1.12
COMMD1-205ENST00000455659 ARVCFO00192 962 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 TLR3O15455 904 aaKnown RBP8.03□□□□□ -1.12
COMMD1-205ENST00000455659 TDP2O95551 362 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 MMP1P03956 469 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 LGALS2P05162 132 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 CYP3A4P08684 503 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 ITGB3BPQ13352 177 aaPredicted RBP8.03□□□□□ -1.12
COMMD1-205ENST00000455659 MFSD10Q14728 455 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 INF2Q27J81 1249 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 PRR16Q569H4 304 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 PIK3AP1Q6ZUJ8 805 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 NIPA1Q7RTP0 329 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 ANKRD33Q7Z3H0 272 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 PLA2G4DQ86XP0 818 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 DIS3L2Q8IYB7 885 aaKnown RBP8.03□□□□□ -1.12
COMMD1-205ENST00000455659 CYP2W1Q8TAV3 490 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 TBCKQ8TEA7 893 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 C8orf76Q96K31 380 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 GPR20Q99678 358 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 ZNF577Q9BSK1 485 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 AGO4Q9HCK5 861 aaKnown RBP8.03□□□□□ -1.12
COMMD1-205ENST00000455659 ZNF215Q9UL58 517 aaPredicted RBP8.03□□□□□ -1.12
COMMD1-205ENST00000455659 KIF3AQ9Y496 699 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 GRIN2DO15399 1336 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 NFASCO94856 1347 aa8.03□□□□□ -1.12
COMMD1-205ENST00000455659 CDH23Q9H251 3354 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 DCDC2CA8MYV0 355 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 IPO5O00410 1097 aaKnown RBP8.02□□□□□ -1.13
COMMD1-205ENST00000455659 MEIS1O00470 390 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 MAFGO15525 162 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 B4GALT4O60513 344 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 ATP9AO75110 1047 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 ARP10275 920 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 CIITAP33076 1130 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 TCF7P36402 384 aaPredicted RBP8.02□□□□□ -1.13
COMMD1-205ENST00000455659 MAGEA10P43363 369 aaPredicted RBP8.02□□□□□ -1.13
COMMD1-205ENST00000455659 PSEN2P49810 448 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 GUCY1B3Q02153 619 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 NR5A1Q13285 461 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 SAFBQ15424 915 aaKnown RBP eCLIP8.02□□□□□ -1.13
COMMD1-205ENST00000455659 KIAA0753Q2KHM9 967 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 LETM2Q2VYF4 491 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 NBPF20Q3BBV1 942 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 UTP14CQ5TAP6 766 aaKnown RBP8.02□□□□□ -1.13
COMMD1-205ENST00000455659 KRT40Q6A162 431 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 NFRKBQ6P4R8 1299 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 CHRDL2Q6WN34 429 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 PPP4R3CPQ6ZMV5 832 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 NEK8Q86SG6 692 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 SLC43A3Q8NBI5 491 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 PPP1R13LQ8WUF5 828 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 KAT2BQ92831 832 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 LENG9Q96B70 501 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 TOX2Q96NM4 488 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 LBHD1Q9BQE6 289 aaPredicted RBP8.02□□□□□ -1.13
COMMD1-205ENST00000455659 SEZ6LQ9BYH1 1024 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 TRMT13Q9NUP7 481 aaKnown RBP8.02□□□□□ -1.13
COMMD1-205ENST00000455659 SLC9A2Q9UBY0 812 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 TBX21Q9UL17 535 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 NOD1Q9Y239 953 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 EMSYQ7Z589 1322 aa8.02□□□□□ -1.13
COMMD1-205ENST00000455659 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
COMMD1-205ENST00000455659 SLC37A4O43826 429 aa8.01□□□□□ -1.13
COMMD1-205ENST00000455659 GAS7O60861 476 aa8.01□□□□□ -1.13
COMMD1-205ENST00000455659 GCFC2P16383 781 aaKnown RBP8.01□□□□□ -1.13
COMMD1-205ENST00000455659 MARK3P27448 753 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms