RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 GIMAP8Q8ND71 665 aaPredicted RBP3.94□□□□□ -1.78
LINC02540-201ENST00000455554 LRRC37BQ96QE4 947 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 IKZF4Q9H2S9 585 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 ZFR2Q9UPR6 939 aaKnown RBP3.94□□□□□ -1.78
LINC02540-201ENST00000455554 H7BY64 318 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 NARSO43776 548 aaKnown RBP3.93□□□□□ -1.78
LINC02540-201ENST00000455554 MCM7P33993 719 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 ZNF143P52747 638 aaPredicted RBP3.93□□□□□ -1.78
LINC02540-201ENST00000455554 PTH1RQ03431 593 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 HNRNPA0Q13151 305 aaKnown RBP3.93□□□□□ -1.78
LINC02540-201ENST00000455554 IFNL2Q8IZJ0 200 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 PHOSPHO1Q8TCT1 267 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 EDAQ92838 391 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 PPP1R14AQ96A00 147 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 MRGPRX3Q96LB0 322 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 SPATA32Q96LK8 384 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 TRIM8Q9BZR9 551 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 METTL5Q9NRN9 209 aaKnown RBP3.93□□□□□ -1.78
LINC02540-201ENST00000455554 HSPBP1Q9NZL4 362 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 MYOTQ9UBF9 498 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 TMEFF2Q9UIK5 374 aaPredicted RBP3.93□□□□□ -1.78
LINC02540-201ENST00000455554 EFR3BQ9Y2G0 817 aa3.93□□□□□ -1.78
LINC02540-201ENST00000455554 MEFVO15553 781 aaPredicted RBP3.92□□□□□ -1.78
LINC02540-201ENST00000455554 DGKIO75912 1065 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 CHGBP05060 677 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 COMTP21964 271 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 CSF2RBP32927 897 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 CASP7P55210 303 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 RACK1P63244 317 aaKnown RBP3.92□□□□□ -1.78
LINC02540-201ENST00000455554 PAK2Q13177 524 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 LSAMPQ13449 338 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 SMAD2Q15796 467 aaKnown RBP3.92□□□□□ -1.78
LINC02540-201ENST00000455554 LSM12Q3MHD2 195 aaKnown RBP3.92□□□□□ -1.78
LINC02540-201ENST00000455554 VASNQ6EMK4 673 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 DTX3Q8N9I9 347 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 RCBTB1Q8NDN9 531 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC02540-201ENST00000455554 EXTL1Q92935 676 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 AJUBAQ96IF1 538 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 CHAMP1Q96JM3 812 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 EPB41L1Q9H4G0 881 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 DLL4Q9NR61 685 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 DDX41Q9UJV9 622 aaKnown RBP3.92□□□□□ -1.78
LINC02540-201ENST00000455554 PCSK5Q92824 1860 aa3.92□□□□□ -1.78
LINC02540-201ENST00000455554 MAFKO60675 156 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 FBXO21O94952 628 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 KNG1P01042 644 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 HOXC12P31275 282 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 ECI1P42126 302 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 INHBCP55103 352 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 NANOS3P60323 173 aaKnown RBP3.91□□□□□ -1.78
LINC02540-201ENST00000455554 ACBD5Q5T8D3 534 aaPredicted RBP3.91□□□□□ -1.78
LINC02540-201ENST00000455554 AGBL4Q5VU57 503 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 GPR155Q7Z3F1 870 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 TAX1BP1Q86VP1 789 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 PROSER1Q86XN7 944 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 BTN2A2Q8WVV5 523 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 SMOC1Q9H4F8 434 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 CLDND1Q9NY35 253 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 PCDHA2Q9Y5H9 948 aa3.91□□□□□ -1.78
LINC02540-201ENST00000455554 A0A087X1B8 175 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 SCG5P05408 212 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 SNRPB2P08579 225 aaKnown RBP3.9□□□□□ -1.79
LINC02540-201ENST00000455554 PDIA4P13667 645 aaKnown RBP3.9□□□□□ -1.79
LINC02540-201ENST00000455554 LTBRP36941 435 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 TESK1Q15569 626 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 ZNF568Q3ZCX4 644 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 TRIM48Q8IWZ4 208 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 REXO1L1PQ8IX06 675 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 PPIL6Q8IXY8 311 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 FUKQ8N0W3 1084 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 KREMEN2Q8NCW0 462 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 TTLL11Q8NHH1 800 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 NEIL1Q96FI4 390 aaPredicted RBP3.9□□□□□ -1.79
LINC02540-201ENST00000455554 SHDQ96IW2 340 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 BACH2Q9BYV9 841 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 GZF1Q9H116 711 aaPredicted RBP3.9□□□□□ -1.79
LINC02540-201ENST00000455554 ASH2LQ9UBL3 628 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 TNFRSF18Q9Y5U5 241 aa3.9□□□□□ -1.79
LINC02540-201ENST00000455554 KRIT1O00522 736 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 PPFIA2O75334 1257 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 RAD17O75943 681 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 CPP00450 1065 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 LCP1P13796 627 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 ACO1P21399 889 aaKnown RBP3.89□□□□□ -1.79
LINC02540-201ENST00000455554 RAC3P60763 192 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 USP10Q14694 798 aaKnown RBP3.89□□□□□ -1.79
LINC02540-201ENST00000455554 NCAPHQ15003 741 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 CYP4F22Q6NT55 531 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 C1orf210Q8IVY1 113 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 DNAJC10Q8IXB1 793 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 ZNF654Q8IZM8 581 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 NEU4Q8WWR8 484 aaPredicted RBP3.89□□□□□ -1.79
LINC02540-201ENST00000455554 KATNBL1Q9H079 304 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 ZFP69BQ9UJL9 534 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 PTPN22Q9Y2R2 807 aa3.89□□□□□ -1.79
LINC02540-201ENST00000455554 TBX1O43435 398 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 CKMP06732 381 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 SKIDA1Q1XH10 827 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms