RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 CNTNAP5Q8WYK1 1306 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 DOCK5Q9H7D0 1870 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 ESYT2A0FGR8 921 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 MEIS2O14770 477 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 SNPHO15079 494 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 PRPF3O43395 683 aaKnown RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 SLC34A2O95436 690 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 GGPS1O95749 300 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 CD4P01730 458 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 PFKMP08237 780 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 MMP3P08254 477 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 GNAT1P11488 350 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 SCG2P13521 617 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 IFNAR1P17181 557 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 XBP1P17861 261 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 RFC2P35250 354 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 FXR1P51114 621 aaKnown RBP eCLIP8.05□□□□□ -1.12
XPC-204ENST00000455144 ARHGAP1Q07960 439 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 APOBRQ0VD83 1088 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 PFKFB3Q16875 520 aaPredicted RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 LY6KQ17RY6 165 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 FAM47CQ5HY64 1035 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 CELF3Q5SZQ8 465 aaKnown RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 LCE2DQ5TA82 110 aaPredicted RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 PSRC1Q6PGN9 363 aaPredicted RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 AFG1LQ8WV93 481 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 BADQ92934 168 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 INPP4AQ96PE3 977 aaPredicted RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 ALDH8A1Q9H2A2 487 aaPredicted RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 RIC8AQ9NPQ8 531 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 BARHL2Q9NY43 387 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 TCEAL9Q9UHQ7 104 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 TBX21Q9UL17 535 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 ZNF215Q9UL58 517 aaPredicted RBP8.05□□□□□ -1.12
XPC-204ENST00000455144 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
XPC-204ENST00000455144 BRCA2P51587 3418 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 TRIM43BA6NCK2 446 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 SMCO2A6NFE2 343 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 SPATA31C2B4DYI2 1134 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 RPLP2P05387 115 aaKnown RBP8.04□□□□□ -1.12
XPC-204ENST00000455144 ACTN1P12814 892 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 SLC35G1Q2M3R5 365 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 USP17L6PQ6QN14 398 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 METTL7BQ6UX53 244 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 SESTD1Q86VW0 696 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 C7orf31Q8N865 590 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 CAGE1Q8TC20 777 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 TRIM43Q96BQ3 446 aaPredicted RBP8.04□□□□□ -1.12
XPC-204ENST00000455144 TCEANC2Q96MN5 208 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 SPATA33Q96N06 139 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 HIPK3Q9H422 1215 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 SLC24A3Q9HC58 644 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 SH3GLB2Q9NR46 395 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 PDRG1Q9NUG6 133 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
XPC-204ENST00000455144 MKI67P46013 3256 aaKnown RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 TMEM265A0A087WTH1 108 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 ARIH2O95376 493 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 DEXIO95424 95 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 FGBP02675 491 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 PDIA3P30101 505 aaKnown RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 ADD1P35611 737 aaKnown RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 ZNF76P36508 570 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 PSEN2P49810 448 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 FUT2Q10981 343 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 WWC2Q6AWC2 1192 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 FAM109BQ6ICB4 259 aaPredicted RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 GALNT17Q6IS24 598 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 TMEM92Q6UXU6 159 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 FAM43BQ6ZT52 329 aaPredicted RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 NIPA1Q7RTP0 329 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 SH3RF1Q7Z6J0 888 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 RAB11FIP4Q86YS3 637 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 CMTR1Q8N1G2 835 aaKnown RBP8.03□□□□□ -1.12
XPC-204ENST00000455144 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 WASF1Q92558 559 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 COPS5Q92905 334 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 IL23AQ9NPF7 189 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 JADE2Q9NQC1 790 aa8.03□□□□□ -1.12
XPC-204ENST00000455144 TANC1Q9C0D5 1861 aa8.02□□□□□ -1.12
XPC-204ENST00000455144 WDR81Q562E7 1941 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.02□□□□□ -1.13
XPC-204ENST00000455144 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.02□□□□□ -1.13
XPC-204ENST00000455144 H3BRB1 525 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 STXBP3O00186 592 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 B4GALT4O60513 344 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 RGS20O76081 388 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 F2P00734 622 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 UBA1P22314 1058 aaKnown RBP8.02□□□□□ -1.13
XPC-204ENST00000455144 CDC27P30260 824 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 PSMC6P62333 389 aa8.02□□□□□ -1.13
XPC-204ENST00000455144 MRPS9P82933 396 aaKnown RBP8.02□□□□□ -1.13
XPC-204ENST00000455144 SMAD3P84022 425 aaKnown RBP8.02□□□□□ -1.13
XPC-204ENST00000455144 PTK7Q13308 1070 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms