RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ADAM17P78536 824 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 GRB10Q13322 594 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 CREB3L3Q68CJ9 461 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 CYFIP1Q7L576 1253 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 CCDC155Q8N6L0 562 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 ATXN2LQ8WWM7 1075 aaKnown RBP18.54■□□□□ 0.56
GPC1-206ENST00000455111 ARNTL2Q8WYA1 636 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 RNPEPQ9H4A4 650 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 H3BRB1 525 aa18.53■□□□□ 0.56
GPC1-206ENST00000455111 SMIM10L2AP0DMW4 78 aa18.53■□□□□ 0.56
GPC1-206ENST00000455111 SMIM10L2BP0DMW5 78 aa18.53■□□□□ 0.56
GPC1-206ENST00000455111 MICALL1Q8N3F8 863 aa18.53■□□□□ 0.56
GPC1-206ENST00000455111 NECAB3Q96P71 396 aaPredicted RBP18.53■□□□□ 0.56
GPC1-206ENST00000455111 TUT1Q9H6E5 874 aaKnown RBP18.53■□□□□ 0.56
GPC1-206ENST00000455111 MLXIPQ9HAP2 919 aa18.53■□□□□ 0.56
GPC1-206ENST00000455111 NLRC5Q86WI3 1866 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 GJB5O95377 273 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 BMP1P13497 986 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 ITGB5P18084 799 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 SMARCA1P28370 1054 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 SART3Q15020 963 aaKnown RBP18.52■□□□□ 0.56
GPC1-206ENST00000455111 PCNX4Q63HM2 1172 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 TYW1BQ6NUM6 668 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 METTL7BQ6UX53 244 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 DBF4BQ8NFT6 615 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 SYMPKQ92797 1274 aaKnown RBP18.52■□□□□ 0.56
GPC1-206ENST00000455111 MTA3Q9BTC8 594 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 COL4A6Q14031 1691 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 TTC28Q96AY4 2481 aa18.52■□□□□ 0.56
GPC1-206ENST00000455111 TLL1O43897 1013 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 LGR5O75473 907 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 KCNA2P16389 499 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 LIFRP42702 1097 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 KCNQ1P51787 676 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 UBE2SQ16763 222 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
GPC1-206ENST00000455111 ADAMTS19Q8TE59 1207 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 GDPD5Q8WTR4 605 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 RRP36Q96EU6 259 aaKnown RBP18.51■□□□□ 0.55
GPC1-206ENST00000455111 SETD4Q9NVD3 440 aa18.51■□□□□ 0.55
GPC1-206ENST00000455111 ABHD14A-ACY1A0A1B0GW23 586 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 GSTTP1A0A1W2PQM5 241 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 C17orf102A2RUQ5 167 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 LINC01553A4QN01 128 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 FIBPO43427 364 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 MCM5P33992 734 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 THPOP40225 353 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 KCNJ6P48051 423 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 MRPS5P82675 430 aaKnown RBP18.5■□□□□ 0.55
GPC1-206ENST00000455111 FUT2Q10981 343 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 PLEKHG4Q58EX7 1191 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 FAM117BQ6P1L5 589 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 TMTC3Q6ZXV5 915 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 RASEFQ8IZ41 740 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 ATP6V0A1Q93050 837 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 TMEM87BQ96K49 555 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
GPC1-206ENST00000455111 LOXHD1Q8IVV2 1947 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.49■□□□□ 0.55
GPC1-206ENST00000455111 RSPH10B2B2RC85 870 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 TNFRSF10AO00220 468 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 STAM2O75886 525 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 PARNO95453 639 aaKnown RBP18.49■□□□□ 0.55
GPC1-206ENST00000455111 RSPH10BP0C881 870 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 EXOSC10Q01780 885 aaKnown RBP18.49■□□□□ 0.55
GPC1-206ENST00000455111 TRAF1Q13077 416 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 ADCK5Q3MIX3 580 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 SGMS1Q86VZ5 419 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 CCDC82Q8N4S0 544 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 SMARCC2Q8TAQ2 1214 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 SUGCTQ9HAC7 445 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 BRPF3Q9ULD4 1205 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 UBIAD1Q9Y5Z9 338 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 CNTNAP5Q8WYK1 1306 aa18.49■□□□□ 0.55
GPC1-206ENST00000455111 ADAMTS3O15072 1205 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 CTSHP09668 335 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 SP4Q02446 784 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 NEDD9Q14511 834 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 UTP14CQ5TAP6 766 aaKnown RBP18.48■□□□□ 0.55
GPC1-206ENST00000455111 RUFY4Q6ZNE9 571 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 FANCBQ8NB91 859 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 LMBR1Q8WVP7 490 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 ZBTB10Q96DT7 871 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 SENP7Q9BQF6 1050 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 FAM217BQ9NTX9 383 aaPredicted RBP18.48■□□□□ 0.55
GPC1-206ENST00000455111 KAT6AQ92794 2004 aa18.48■□□□□ 0.55
GPC1-206ENST00000455111 CCDC69A6NI79 296 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 KIF28PB7ZC32 967 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 KIF5BP33176 963 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 ERVK-21P61565 698 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 HTRA4P83105 476 aaPredicted RBP18.47■□□□□ 0.55
GPC1-206ENST00000455111 IKBKEQ14164 716 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 GNPTABQ3T906 1256 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 WWC2Q6AWC2 1192 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 NFXL1Q6ZNB6 911 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 SP7Q8TDD2 431 aaPredicted RBP18.47■□□□□ 0.55
GPC1-206ENST00000455111 PCYT2Q99447 389 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 RAD9AQ99638 391 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 LZTS2Q9BRK4 669 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms