RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 KIAA0753Q2KHM9 967 aa23.33■■□□□ 1.33
TNRC18-208ENST00000455076 TMEM240Q5SV17 173 aa23.33■■□□□ 1.33
TNRC18-208ENST00000455076 GDF6Q6KF10 455 aaPredicted RBP23.33■■□□□ 1.33
TNRC18-208ENST00000455076 FAM177A1Q8N128 213 aaPredicted RBP23.33■■□□□ 1.33
TNRC18-208ENST00000455076 CCDC148Q8NFR7 591 aa23.33■■□□□ 1.33
TNRC18-208ENST00000455076 RNPC3Q96LT9 517 aaKnown RBP23.33■■□□□ 1.33
TNRC18-208ENST00000455076 NOP56O00567 594 aaKnown RBP23.32■■□□□ 1.32
TNRC18-208ENST00000455076 GNA11P29992 359 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 SMAD3P84022 425 aaKnown RBP23.32■■□□□ 1.32
TNRC18-208ENST00000455076 AKAP17AQ02040 695 aaKnown RBP23.32■■□□□ 1.32
TNRC18-208ENST00000455076 FAM109BQ6ICB4 259 aaPredicted RBP23.32■■□□□ 1.32
TNRC18-208ENST00000455076 CAGE1Q8TC20 777 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 VWCEQ96DN2 955 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 MXRA8Q9BRK3 442 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 SLC26A6Q9BXS9 759 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 C6orf50Q9HD87 102 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 SH3GLB2Q9NR46 395 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 HDAC6Q9UBN7 1215 aa23.32■■□□□ 1.32
TNRC18-208ENST00000455076 ATP9AO75110 1047 aa23.31■■□□□ 1.32
TNRC18-208ENST00000455076 PFKMP08237 780 aa23.31■■□□□ 1.32
TNRC18-208ENST00000455076 BFSP2Q13515 415 aa23.31■■□□□ 1.32
TNRC18-208ENST00000455076 PTGISQ16647 500 aa23.31■■□□□ 1.32
TNRC18-208ENST00000455076 CEP55Q53EZ4 464 aa23.31■■□□□ 1.32
TNRC18-208ENST00000455076 NIPA1Q7RTP0 329 aa23.31■■□□□ 1.32
TNRC18-208ENST00000455076 C7orf31Q8N865 590 aa23.31■■□□□ 1.32
TNRC18-208ENST00000455076 H3BRB1 525 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 SORBS3O60504 671 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 CYP3A4P08684 503 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 RFC2P35250 354 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 CCL23P55773 120 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 TRIM22Q8IYM9 498 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 REXO1Q8N1G1 1221 aaKnown RBP23.3■■□□□ 1.32
TNRC18-208ENST00000455076 CCDC155Q8N6L0 562 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 BICD2Q8TD16 824 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 PPP1R13LQ8WUF5 828 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 PGBD1Q96JS3 809 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 TUT1Q9H6E5 874 aaKnown RBP23.3■■□□□ 1.32
TNRC18-208ENST00000455076 KCNH7Q9NS40 1196 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 TMEM260Q9NX78 707 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 NOD1Q9Y239 953 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 NFASCO94856 1347 aa23.3■■□□□ 1.32
TNRC18-208ENST00000455076 MEIS1O00470 390 aa23.29■■□□□ 1.32
TNRC18-208ENST00000455076 ARHGAP4P98171 946 aa23.29■■□□□ 1.32
TNRC18-208ENST00000455076 ANKRD1Q15327 319 aa23.29■■□□□ 1.32
TNRC18-208ENST00000455076 CPLX2Q6PUV4 134 aaKnown RBP23.29■■□□□ 1.32
TNRC18-208ENST00000455076 RPUSD2Q8IZ73 545 aaKnown RBP23.29■■□□□ 1.32
TNRC18-208ENST00000455076 AFAP1L1Q8TED9 768 aa23.29■■□□□ 1.32
TNRC18-208ENST00000455076 HERVK_113Q902F9 699 aa23.29■■□□□ 1.32
TNRC18-208ENST00000455076 DHX38Q92620 1227 aaKnown RBP23.29■■□□□ 1.32
TNRC18-208ENST00000455076 ALG1Q9BT22 464 aa23.29■■□□□ 1.32
TNRC18-208ENST00000455076 CDH23Q9H251 3354 aa23.29■■□□□ 1.32
TNRC18-208ENST00000455076 CPLX1O14810 134 aa23.28■■□□□ 1.32
TNRC18-208ENST00000455076 DEXIO95424 95 aa23.28■■□□□ 1.32
TNRC18-208ENST00000455076 PTK7Q13308 1070 aa23.28■■□□□ 1.32
TNRC18-208ENST00000455076 ZNF365Q70YC5 407 aa23.28■■□□□ 1.32
TNRC18-208ENST00000455076 ZNF215Q9UL58 517 aaPredicted RBP23.28■■□□□ 1.32
TNRC18-208ENST00000455076 TELO2Q9Y4R8 837 aa23.28■■□□□ 1.32
TNRC18-208ENST00000455076 TRIP12Q14669 1992 aaPredicted RBP23.28■■□□□ 1.32
TNRC18-208ENST00000455076 SCN5AQ14524 2016 aa23.28■■□□□ 1.32
TNRC18-208ENST00000455076 ADAMTS3O15072 1205 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 PFKFB2O60825 505 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 SEC24BO95487 1268 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 IQCF3P0C7M6 154 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 ACRP10323 421 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 SSRP1Q08945 709 aaKnown RBP23.27■■□□□ 1.32
TNRC18-208ENST00000455076 SCRN1Q12765 414 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 TRIM71Q2Q1W2 868 aaKnown RBP23.27■■□□□ 1.32
TNRC18-208ENST00000455076 JAKMIP3Q5VZ66 844 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 CYP2W1Q8TAV3 490 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 SEPT1Q8WYJ6 367 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 SCLYQ96I15 445 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 VPS54Q9P1Q0 977 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 TPCN1Q9ULQ1 816 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 STK36Q9NRP7 1315 aa23.27■■□□□ 1.32
TNRC18-208ENST00000455076 IGLV3-22A0A075B6J6 115 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 TMEM265A0A087WTH1 108 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 PARNO95453 639 aaKnown RBP23.26■■□□□ 1.31
TNRC18-208ENST00000455076 TCF7P36402 384 aaPredicted RBP23.26■■□□□ 1.31
TNRC18-208ENST00000455076 AK2P54819 239 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 CHMP4BP1P59074 171 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 HIC1Q14526 733 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 RETREG2Q8NC44 543 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 LARP6Q9BRS8 491 aaKnown RBP23.26■■□□□ 1.31
TNRC18-208ENST00000455076 MTIF3Q9H2K0 278 aaKnown RBP23.26■■□□□ 1.31
TNRC18-208ENST00000455076 AGO4Q9HCK5 861 aaKnown RBP23.26■■□□□ 1.31
TNRC18-208ENST00000455076 JPH1Q9HDC5 661 aaPredicted RBP23.26■■□□□ 1.31
TNRC18-208ENST00000455076 EMSYQ7Z589 1322 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 COL6A3P12111 3177 aa23.26■■□□□ 1.31
TNRC18-208ENST00000455076 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.25■■□□□ 1.31
TNRC18-208ENST00000455076 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.25■■□□□ 1.31
TNRC18-208ENST00000455076 GSTTP1A0A1W2PQM5 241 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 FAM86B1E9PN63 330 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 CDKL5O76039 1030 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 FGBP02675 491 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 FAM86B2P0C5J1 330 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 SMIM10L2AP0DMW4 78 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 SMIM10L2BP0DMW5 78 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 CIITAP33076 1130 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 C8orf34Q49A92 452 aa23.25■■□□□ 1.31
TNRC18-208ENST00000455076 SERINC5Q86VE9 423 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms