RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SESTD1Q86VW0 696 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 FBXO11Q86XK2 927 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 CXorf38Q8TB03 319 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 WASF1Q92558 559 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 OTUD5Q96G74 571 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 C8orf76Q96K31 380 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 MFRPQ9BY79 579 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 CCDC113Q9H0I3 377 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 MROH8Q9H579 483 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 HOXC10Q9NYD6 342 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 NRBP1Q9UHY1 535 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 USP20Q9Y2K6 914 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 PCDHA1Q9Y5I3 950 aa5.66□□□□□ -1.5
RIF1-207ENST00000454583 MTCL1Q9Y4B5 1905 aaKnown RBP5.66□□□□□ -1.5
RIF1-207ENST00000454583 LAMA3Q16787 3333 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 TRIM75PA6NK02 468 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 ZNF862O60290 1169 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 AOC2O75106 756 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 PPFIA3O75145 1194 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 MED24O75448 989 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 SLC25A27O95847 323 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 NDUFA8P51970 172 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 CNTN2Q02246 1040 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 CCDC173Q0VFZ6 552 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 NFIL3Q16649 462 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 BMT2Q1RMZ1 405 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 TRIM71Q2Q1W2 868 aaKnown RBP5.65□□□□□ -1.5
RIF1-207ENST00000454583 PAXIP1Q6ZW49 1069 aaPredicted RBP5.65□□□□□ -1.5
RIF1-207ENST00000454583 TAS1R3Q7RTX0 852 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 CTCFLQ8NI51 663 aaPredicted RBP5.65□□□□□ -1.5
RIF1-207ENST00000454583 CHURC1Q8WUH1 139 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 GPRASP2Q96D09 838 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 TRERF1Q96PN7 1200 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 WDR11Q9BZH6 1224 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 CSRNP2Q9H175 543 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 GDPD2Q9HCC8 539 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 RAVER2Q9HCJ3 691 aaKnown RBP5.65□□□□□ -1.5
RIF1-207ENST00000454583 DDX41Q9UJV9 622 aaKnown RBP5.65□□□□□ -1.5
RIF1-207ENST00000454583 PNMA2Q9UL42 364 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 SMC3Q9UQE7 1217 aa5.65□□□□□ -1.5
RIF1-207ENST00000454583 COL6A1P12109 1028 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 PDCP20941 246 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 FECHP22830 423 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 PTGS1P23219 599 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 ADCY7P51828 1080 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 MORC3Q14149 939 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 SNX17Q15036 470 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 CAVIN1Q6NZI2 390 aaKnown RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 KRT25Q7Z3Z0 450 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 GJA10Q969M2 543 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 NIFKQ9BYG3 293 aaKnown RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 FGFBP2Q9BYJ0 223 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 UNC45AQ9H3U1 944 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 PAK6Q9NQU5 681 aaPredicted RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 Q9Y3F1 56 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 ZNF638Q14966 1978 aaKnown RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 FOXN1O15353 648 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 GCFC2P16383 781 aaKnown RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 ERCC3P19447 782 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 COPB2P35606 906 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 GCLCP48506 637 aaPredicted RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 LACTBP83111 547 aaPredicted RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 CUL5Q93034 780 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 TMEM121BQ9BXQ6 578 aaPredicted RBP5.65□□□□□ -1.51
RIF1-207ENST00000454583 BCL11AQ9H165 835 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 ST6GALNAC4Q9H4F1 302 aa5.65□□□□□ -1.51
RIF1-207ENST00000454583 SYCE3A1L190 88 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 SLC15A5A6NIM6 579 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 PPP1R12BO60237 982 aaPredicted RBP5.64□□□□□ -1.51
RIF1-207ENST00000454583 CUTAO60888 179 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 CALML3P27482 149 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 PBX1P40424 430 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 MGAT3Q09327 533 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 C1orf186Q6ZWK4 172 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 NEK8Q86SG6 692 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 TRMT44Q8IYL2 757 aaKnown RBP5.64□□□□□ -1.51
RIF1-207ENST00000454583 CLIC6Q96NY7 704 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 RIT2Q99578 217 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 C7orf25Q9BPX7 421 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 GLT8D2Q9H1C3 349 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 TMX1Q9H3N1 280 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 USP25Q9UHP3 1055 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 MUC22E2RYF6 1773 aaPredicted RBP5.64□□□□□ -1.51
RIF1-207ENST00000454583 MBLAC1A4D2B0 266 aaPredicted RBP5.64□□□□□ -1.51
RIF1-207ENST00000454583 ZNF18P17022 549 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 LONP1P36776 959 aaKnown RBP5.64□□□□□ -1.51
RIF1-207ENST00000454583 PTGDRQ13258 359 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 INF2Q27J81 1249 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 LONRF3Q496Y0 759 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 TTC38Q5R3I4 469 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 IRF2BP1Q8IU81 584 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 CCDC148Q8NFR7 591 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 TRIB2Q92519 343 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 GPR20Q99678 358 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 PSTPIP2Q9H939 334 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 CABP5Q9NP86 173 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 BIN2Q9UBW5 565 aaPredicted RBP5.64□□□□□ -1.51
RIF1-207ENST00000454583 DBR1Q9UK59 544 aaKnown RBP5.64□□□□□ -1.51
RIF1-207ENST00000454583 PCDHB13Q9Y5F0 798 aa5.64□□□□□ -1.51
RIF1-207ENST00000454583 ANAPC1Q9H1A4 1944 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms