RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 AZIN2Q96A70 460 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 HIC2Q96JB3 615 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 CATSPER2Q96P56 530 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 RPS6KC1Q96S38 1066 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 HAPLN3Q96S86 360 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 BHMT2Q9H2M3 363 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 UTP6Q9NYH9 597 aaKnown RBP9.15□□□□□ -0.95
SMCO1-202ENST00000452776 SPATA7Q9P0W8 599 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 DBF4Q9UBU7 674 aaPredicted RBP9.15□□□□□ -0.95
SMCO1-202ENST00000452776 LRWD1Q9UFC0 647 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 CNOT7Q9UIV1 285 aaKnown RBP9.15□□□□□ -0.95
SMCO1-202ENST00000452776 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 CTNND2Q9UQB3 1225 aa9.15□□□□□ -0.95
SMCO1-202ENST00000452776 PIK3C2BO00750 1634 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF609O15014 1411 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 POTEFA5A3E0 1075 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 BHMG1C9JSJ3 638 aaPredicted RBP9.14□□□□□ -0.95
SMCO1-202ENST00000452776 NVLO15381 856 aaKnown RBP9.14□□□□□ -0.95
SMCO1-202ENST00000452776 GTPBP6O43824 516 aaPredicted RBP9.14□□□□□ -0.95
SMCO1-202ENST00000452776 TPBGLP0DKB5 382 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 HSPD1P10809 573 aaKnown RBP9.14□□□□□ -0.95
SMCO1-202ENST00000452776 CPA3P15088 417 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF24P17028 368 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 VCAM1P19320 739 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 MAGEA1P43355 309 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 RAB15P59190 212 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 FKBP15Q5T1M5 1219 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 RNF43Q68DV7 783 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 NFRKBQ6P4R8 1299 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 KIAA0825Q8IV33 1275 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 NME8Q8N427 588 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 UBLCP1Q8WVY7 318 aaPredicted RBP9.14□□□□□ -0.95
SMCO1-202ENST00000452776 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 FAM136AQ96C01 138 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 TUBB6Q9BUF5 446 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 TMEM109Q9BVC6 243 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 SLITRK6Q9H5Y7 841 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 PREBQ9HCU5 417 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 STRN4Q9NRL3 753 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 CNOT8Q9UFF9 292 aaKnown RBP9.14□□□□□ -0.95
SMCO1-202ENST00000452776 PLAGL2Q9UPG8 496 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 STK38LQ9Y2H1 464 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 BZW2Q9Y6E2 419 aaKnown RBP9.14□□□□□ -0.95
SMCO1-202ENST00000452776 MRC1P22897 1456 aa9.14□□□□□ -0.95
SMCO1-202ENST00000452776 MED1Q15648 1581 aaPredicted RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 WNT7AO00755 349 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ECE2O60344 883 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 DDX58O95786 925 aaKnown RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 OAS1P00973 400 aaKnown RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ZFYP08048 801 aaPredicted RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 PDHA1P08559 390 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 NUDT17P0C025 328 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 BCRP11274 1271 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 CHN1P15882 459 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ATP5DP30049 168 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 CDC25CP30307 473 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 HOXA7P31268 230 aaPredicted RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 RFC5P40937 340 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 METAP2P50579 478 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 SCNN1BP51168 640 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 PHEXP78562 749 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 SSRP1Q08945 709 aaKnown RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ACVR2BQ13705 512 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ITGA9Q13797 1035 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 PLS1Q14651 629 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 SFMBT2Q5VUG0 894 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 KSR2Q6VAB6 950 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 CCDC84Q86UT8 332 aaPredicted RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 LRRC34Q8IZ02 419 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ALDH16A1Q8IZ83 802 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 KRT12Q99456 494 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 TLR10Q9BXR5 811 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 CARD9Q9H257 536 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 PIDD1Q9HB75 910 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 TBCCD1Q9NVR7 557 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 KLHL14Q9P2G3 628 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 TMEM59LQ9UK28 342 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 BARX2Q9UMQ3 279 aaPredicted RBP9.13□□□□□ -0.95
SMCO1-202ENST00000452776 AGAP1Q9UPQ3 857 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 ATP8A1Q9Y2Q0 1164 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 SH3GLB1Q9Y371 365 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 COL15A1P39059 1388 aa9.13□□□□□ -0.95
SMCO1-202ENST00000452776 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 RCCD1A6NED2 376 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 AKR1B10O60218 316 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 UNC5CO95185 931 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 MOCS3O95396 460 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 EYA4O95677 639 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 A1BGP04217 495 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 CDC25AP30304 524 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 SERPINB8P50452 374 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 RNF220Q5VTB9 566 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 CCDC174Q6PII3 467 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF554Q86TJ5 538 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 USP38Q8NB14 1042 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms